EY702117

Overview
NameEY702117
Unique NameEY702117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SHESH (Histidine ammonia-lyase OS=Shewanella sediminis (strain HAW-EB3) GN=hutH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29
Identity = 82/245 (33.47%), Postives = 127/245 (51.84%), Query Frame = 1
Query:   40 STTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            +T R  M++++N+L +G+SGIR E++  +  L+N  + PC+P +G++ ASGDL PL+++   L G          G+I+ A+E  + AG    EL  KEGLAL+NGT   + LA   LF A +L   S ++ A+  E   G     D   H  +   GQI++AA+   +L   S ++    L  +D   +  QD Y+LR  P  L   +  IR A + +    + V DNPL+          GNF
Sbjct:   95 ATVRLMMVLKINSLSRGFSGIRLEVINFLIALVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSY---KGQILSAKEGLEIAGLKPIELAAKEGLALLNGTQASTALALEGLFNAEDLFAASSVIGAMSVEAAMGSRSPFDSRIHAARGQKGQIDSAALFRLLLGDESEIS----LSHVD--CERVQDPYSLRCQPQVLGACLTQIRHAAEVLGTEANGVTDNPLVFQDTGDIISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALAR (Histidine ammonia-lyase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hutH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29
Identity = 80/248 (32.26%), Postives = 131/248 (52.82%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+AA +  H+L  +S +  A+  H  + +Q P    Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDAARLFRHLLTETSAI--AESHHHCNKVQDP----YSLRCQPQVMGACLTQLRQTKEVLLVEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_BACSK (Histidine ammonia-lyase OS=Bacillus clausii (strain KSM-K16) GN=hutH PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29
Identity = 78/245 (31.84%), Postives = 125/245 (51.02%), Query Frame = 1
Query:   46 TRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNFRG 780
            ++A M++R N L +G+SG+R E++E + +L+N +I PC+P +G++ ASGDL PLS++A +L G    +     GE +       + G     LQ KEGLAL+NGT   + +  +   EA  LA   E ++A+  E +QG  +  D   H  + +  QI+ AA M H+L GS               +K  QD Y+LR  P       + + +    +    ++  DNPL+    ++    GNF G
Sbjct:   95 SQAMMVLRANALAKGFSGVRLEVVEMLLELINKDIYPCIPSQGSLGASGDLAPLSHLALVLIGEGEVRY---RGECMSTASCFAKLGIQPLTLQAKEGLALINGTQAMTAVGVVAYLEAEKLAYQGEQIAAVTMEGLQGIIDAFDQAVHVARGYQEQIDVAARMRHLLQGSKLTTKQG--------EKRVQDAYSLRCIPQVHGAVWQALGYVKDKLLIEMNAATDNPLLFDEGEKVISGGNFHG 328          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALTY (Histidine ammonia-lyase OS=Salmonella typhimurium GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALSV (Histidine ammonia-lyase OS=Salmonella schwarzengrund (strain CVM19633) GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALPC (Histidine ammonia-lyase OS=Salmonella paratyphi C (strain RKS4594) GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALPB (Histidine ammonia-lyase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALNS (Histidine ammonia-lyase OS=Salmonella newport (strain SL254) GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALHS (Histidine ammonia-lyase OS=Salmonella heidelberg (strain SL476) GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
BLAST of EY702117 vs. ExPASy Swiss-Prot
Match: HUTH_SALG2 (Histidine ammonia-lyase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hutH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1
Query:   31 LPHSTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHIL-DGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPTWLRPQIEVIRFATKSIERXXHSVNDNPLIDVSRKQAYMVGNF 774
            L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL+NGT   +  A   LFEA  L   + +  A+  E + G     D   H  +   GQI+ A +  H+L D S+   +    H++       QD Y+LR  P  +   +  +R   + +    ++V+DNPL+     +    GNF
Sbjct:   92 LDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFALRGLFEAQELFASAVVCGALTTEAVLGSRRPFDARIHAARGQQGQIDVARLFRHLLTDTSAIAESHHHCHKV-------QDPYSLRCQPQVMGACLTQLRQTKEVLLAEANAVSDNPLVFADAGEVISGGNF 330          
The following BLAST results are available for this feature:
BLAST of EY702117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
HUTH_SHESH2.041e-2933.47Histidine ammonia-lyase OS=Shewanella sediminis (s... [more]
HUTH_SALAR2.041e-2932.26Histidine ammonia-lyase OS=Salmonella arizonae (st... [more]
HUTH_BACSK3.482e-2931.84Histidine ammonia-lyase OS=Bacillus clausii (strai... [more]
HUTH_SALTY4.547e-2931.73Histidine ammonia-lyase OS=Salmonella typhimurium ... [more]
HUTH_SALSV4.547e-2931.73Histidine ammonia-lyase OS=Salmonella schwarzengru... [more]
HUTH_SALPC4.547e-2931.73Histidine ammonia-lyase OS=Salmonella paratyphi C ... [more]
HUTH_SALPB4.547e-2931.73Histidine ammonia-lyase OS=Salmonella paratyphi B ... [more]
HUTH_SALNS4.547e-2931.73Histidine ammonia-lyase OS=Salmonella newport (str... [more]
HUTH_SALHS4.547e-2931.73Histidine ammonia-lyase OS=Salmonella heidelberg (... [more]
HUTH_SALG24.547e-2931.73Histidine ammonia-lyase OS=Salmonella gallinarum (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702117 ID=EY702117; Name=EY702117; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGAACAGAGTCATCTCACACGCTACCTCACTCAACAACAAG
GGCAGCCATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCTGGCA
TCCGATTTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATC
ACTCCATGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGT
TCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAAGG
CCACCGGGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAA
GCGGGTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTGT
CAATGGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGG
CTAACAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAA
GTCATGCAAGGCAAACCTGAGTTCACTGATCACTTGACACACAAATTGAA
GCACCATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCTCG
ATGGCAGCTCTTATGTTAACGCGGCTAAGAAGTTGCATGAGATTGATCCT
CTGCAGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCCACATG
GCTNCGCCCTCAGATCGAAGTGATTCGGTTTGCAACCAAGTCTATTGAAC
GGNAGATNCACTCGGTGAATGACAATCCCCTGATCGACGTTTCAAGGAAA
CAGGCCTACATGGTGGGCAATTTCAGGGGACCCCNANTTGTGTCTCAATG
GACATACCCGTTGGGCTATTGCGGCATAGGAAGCTCATGTTTGCCAATTT
TCTGAACTGNCAACGATTTTACAACATGGATTGCCG
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