EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9247 contig Csv1_Contig9247:14..514. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 8.282e-60
Identity = 112/143 (78.32%), Postives = 120/143 (83.92%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            KIKIGINGFGRIGRLVARVAL+RDDVELVAVNDPFI+TDYMTYMFKYDSVHGQWK++EL VKD  TLLFG+KPV VF  RNPEEIPWA TGA+ +VESTGVFTD              V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 146          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 8.282e-60
Identity = 112/142 (78.87%), Postives = 120/142 (84.51%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            IKIGINGFGRIGRLVARV LQR+D ELVAVNDPFI+T+YMTYMFKYDSVHGQWKH+++KVKDEKTLLFGEK V VFG RNPEEIPW  TGA+YVVESTGVFTD              V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    4 IKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPE 145          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 4.110e-59
Identity = 112/148 (75.68%), Postives = 120/148 (81.08%), Query Frame = 3
Query:   57 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            M    KIKIGINGFGRIGRLVARVAL RDD+ELV VNDPFISTDYM+YMFKYDSVHG+WKH+E+ VKD KTLLFGEK VAVFG RNPEEIPW + GAEYVVESTGVFTD              VVISAPSKDAPMFVVGVNE +YK +
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALTRDDIELVGVNDPFISTDYMSYMFKYDSVHGKWKHHEVNVKDSKTLLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAKKVVISAPSKDAPMFVVGVNEHQYKSD 148          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.011e-59
Identity = 112/134 (83.58%), Postives = 116/134 (86.57%), Query Frame = 3
Query:   99 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKH+ELKVKDEKTLLFGEK V VFG RNPEEIPWA+ GA++VVESTGVFTD              VVISAPSKDAPMFVVGVNEKEYKPE
Sbjct:    1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPE 134          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 2.040e-58
Identity = 109/140 (77.86%), Postives = 118/140 (84.29%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++ +KD KTLLFGEKPV VFG RNPEEIPW + GAEYVVESTGVFTD              VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIALKDSKTLLFGEKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.664e-58
Identity = 108/140 (77.14%), Postives = 119/140 (85.00%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            KIKIGINGFGRIGRLVARVALQ DDVELVAVNDPFI+T+YMTYMFKYD+VHG WKH+++K+KD+KTLLFGEKPV VFG RNPEEIPW + GA+YVVESTGVFTD              VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTEYMTYMFKYDTVHGHWKHSDIKLKDDKTLLFGEKPVTVFGVRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.664e-58
Identity = 113/148 (76.35%), Postives = 121/148 (81.76%), Query Frame = 3
Query:   57 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            M    KIKIGINGFGRIGRLVARVALQRDD+ELVAVNDPFIST+ +T +FKYDSVHGQWK +E+KVKDEKTLLFGEK VAVFG RNPEEIPW + GAEYVVESTGVFTD              VVISAPSKDAPMFVVGVNE EYK +
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALQRDDIELVAVNDPFISTESLTSLFKYDSVHGQWKKHEVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSD 148          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 3.480e-58
Identity = 108/140 (77.14%), Postives = 118/140 (84.29%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVFTD              VVISAPSKDAPMFV GVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKY 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 3.480e-58
Identity = 108/140 (77.14%), Postives = 118/140 (84.29%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVFTD              VVISAPSKDAPMFV GVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKY 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 7.752e-58
Identity = 110/143 (76.92%), Postives = 119/143 (83.22%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            K+K+GINGFGRIGRLVARV LQRDD ELVAVNDPFISTDYMTYMFKYDSVHGQ K +E+K+KDEKTLLFGE PVAVFG RNPEEIPW + GA++VVESTGVFTD              VVISAPSKDAPMFVVGVNE EYK +
Sbjct:    3 KVKVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSD 145          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3PC_PEA8.282e-6078.32Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA8.282e-6078.87Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY4.110e-5975.68Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC7.011e-5983.58Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PD_MAIZE2.040e-5877.86Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PX_HORVU2.664e-5877.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TAXBA2.664e-5876.35Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ3.480e-5877.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI3.480e-5877.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR7.752e-5876.92Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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