EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.776e-31
Identity = 74/141 (52.48%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   78 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            KIGINGFGRIGRLV R A+ +    +VAVNDPFI  +YM Y+FK+DS HG++K   +  +    ++ G+K + VF  R+P  I WA  GAEYVVESTGVFT               VVISAPS DAPMFV GVN   Y P+
Sbjct:    3 KIGINGFGRIGRLVLRAAVDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFK-GTVSAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTTEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYSPD 140          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.776e-31
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            +K+ ING G+IGRLV R+AL R +VE+VA+NDPFI+ DY  YMFKYDS HG++  +     +  TL+   K + VF  R+P ++PW + G +  ++STGVF +              VVI+APS  APMFV+GVNE++Y  E
Sbjct:    2 VKVAINGLGKIGRLVMRIALSRANVEVVAINDPFITVDYAAYMFKYDSTHGKYAGD--VQYEGNTLVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYAGE 141          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P3_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Saccharomyces cerevisiae GN=TDH3 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 2.776e-31
Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            +++ INGFGRIGRLV R+AL R +VE+VA+NDPFI+ DY  YMFKYDS HG++   E+   D+K ++   K +A +  R+P  +PW  +  +  ++STGVF +              VVI+APS  APMFV+GVNE++Y
Sbjct:    2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVS-HDDKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKY 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.626e-31
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            ++I INGFGRIGRLV R+AL R ++E+VA+NDPFI+ DY  YMFKYDS HG++   E+   D K+L+   K V VF  R+P  +PW     +  ++STG+F +              VVI+APS  APMFVVGVNE +Y
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKNIEVVAINDPFITVDYAAYMFKYDSTHGRF-DGEVS-HDGKSLIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.626e-31
Identity = 73/141 (51.77%), Postives = 90/141 (63.83%), Query Frame = 3
Query:   78 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            KIGINGFGRIGRLV R A+ +    +VAVNDPFI  +YM Y+FK+DS HG++K   +  +    ++ G+K + VF  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV GVN   Y P+
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFK-GTVAAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYSPD 140          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 4.736e-31
Identity = 68/139 (48.92%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            ++I INGFGRIGRLV R+AL R ++E+VA+NDPFI+ DY  YMFKYDS HG++   E+   D K L+   K V VF  R+P  +PW     +  ++STG+F +              VVI+APS  APMFVVGVNE +Y
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKNIEVVAINDPFITVDYAAYMFKYDSTHGRF-DGEVS-HDGKALIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.185e-31
Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTD-XXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYK 494
            + K+GINGFGRIGRLV R A  ++ V++V+VNDPFI  +YM YM K DS HG +   E+  ++ K  + G K ++V   R+P  IPW K GAEYVVESTGVFT                V+ISAPS DAPMFVVGVNE  Y+
Sbjct:    3 RAKVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFP-GEVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYE 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.055e-30
Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 3
Query:   69 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 497
            +++ +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K   ++ ++ + L+     ++V+  + P++IPW   G+ YVVESTGV+                VVISAPS DAP FV+GVNE  Y P
Sbjct:   75 RELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSIEAASNHISAGAQRVVISAPSPDAPTFVMGVNENNYNP 214          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.009e-30
Identity = 67/140 (47.86%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYK 494
            + + INGFGRIGRLV R + +   + +VA+NDPF+ST YM YM +YD+VHG  K +     DE  +    KP+ VF   NPE I W +   +YVVESTG FT               VVISAPS DAPMFV+GVN + Y+
Sbjct:    1 MNVAINGFGRIGRLVLRASAKNPLINIVAINDPFVSTTYMEYMLEYDTVHG--KFDGSLSHDETHIFVNGKPIRVFNEMNPENIKWGEEQVQYVVESTGAFTTLEKASTHLKNGVEKVVISAPSSDAPMFVMGVNHELYE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 4.009e-30
Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYK 494
            + IGINGFGRIGRLV R +L+  +  ++A+N+PF+   YM YMFKYDS HG++K     +  E   +     + VF  ++P  I W+  GAEY+VESTG+F                VVISAPS DAPM+V+GVNE+ Y+
Sbjct:    3 VPIGINGFGRIGRLVLRASLENPECRVLAINEPFMDVKYMVYMFKYDSTHGRFKGTVEDINGE--FVVNGNKIHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3P_DROHY2.776e-3152.48Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3P_ASHGO2.776e-3146.48Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P3_YEAST2.776e-3146.76Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Sacc... [more]
G3P2_KLUMA3.626e-3148.92Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P1_DROME3.626e-3151.77Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]
G3P3_KLUMA4.736e-3148.92Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P_SCHMA6.185e-3152.11Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3PT_MACFA1.055e-3046.85Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P_PHYIN4.009e-3047.86Glyceraldehyde-3-phosphate dehydrogenase OS=Phytop... [more]
G3P_DICDI4.009e-3045.71Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
back to top