EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.418e-27
Identity = 65/145 (44.83%), Postives = 85/145 (58.62%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD---APMFVVGVNEKEYKPE 500
            +KIGINGFGRIGRLVAR+A+    V LV +ND  +    + Y+FKYDS HG +      V  E+ ++  ++ +  F  RNP ++PW   GA+YVVESTG+FT               V+ISAPSKD    P FVVGVN   Y  +
Sbjct:    2 LKIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHGSY--GGTVVAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNAD 143          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 9.242e-27
Identity = 68/144 (47.22%), Postives = 89/144 (61.81%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKEYKPE 500
            IKIGINGFGRIGR+V R A+    D+E+VA+ND  +  DY+ YM KYDSVHG++   E+ V D  TL+   K + +   ++P E+ W + GA+ VVESTG+F                V++SAPSK D PMFV GVN   YK E
Sbjct:    3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYKGE 143          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 115.546 bits (288), Expect = 1.335e-25
Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD---APMFVVGVNEKEYKP 497
            K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + Y+ KYDS HG+ + ++++ KD+  ++ G   +     RNP E+PW K GA+YVVESTG+FTD              V+ISAP+KD       +VGVN   + P
Sbjct:    3 KLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLR-SQVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 1.335e-25
Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD---APMFVVGVNEKEYKP 497
            K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + Y+ KYDS HG+ + ++++ KD+  ++ G   +     RNP E+PW K GA+YVVESTG+FTD              V+ISAP+KD       +VGVN   + P
Sbjct:    3 KLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLR-SQVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 8.650e-25
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 3
Query:  147 VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            V+++AV+DPFI   YM YMFKYDSVHG++K   +++KD K ++ G  P+ VF  R+P  I W   GA+YVVES+GVFT               V+ISAPS DAPMFVVGVN   Y
Sbjct:    6 VKVLAVSDPFIDLQYMVYMFKYDSVHGRFK-GTVEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVGVNLDAY 118          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_BUCAP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gapA PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 8.650e-25
Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKEYKPE 500
            IKIGINGFGRIGR++ R+A +R+++E+VA+ND  +   Y+ YM KYDS HG +K  +++VK+   ++ G+K + +   ++PE++ W K   + V+ESTG+F                VVI+ PSK D PMFV G N  +YK E
Sbjct:    3 IKIGINGFGRIGRVLFRLAQERENIEVVAIND-LLDPKYIAYMLKYDSTHGNFK-KDIEVKNNNLIINGKK-IRITSIKDPEKLMWDKLLIDVVIESTGLFLTKDTAYKHILSGAKKVVITGPSKDDIPMFVRGANFDKYKGE 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 8.650e-25
Identity = 62/143 (43.36%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKEYKPE 500
            I++GINGFGRIGR+V R A +R+D+E+V +ND  +  DYM YM KYDS HG+++   ++V+    ++ G+K + V   R+P  + W +   + VVESTG+F                VVI+ PSK D PMFV+GVN   YK E
Sbjct:    3 IRVGINGFGRIGRVVFRAAQRRNDIEIVGIND-LLDADYMAYMLKYDSTHGRFE-GAVEVQGGALVVNGKK-IRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKGE 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 8.650e-25
Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD-APMFVVGVNEKEY 491
            IK+GINGFGRIGR+V R A +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W + G + V E+TG+F                VV++ PSKD  PMFV G N  +Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.130e-24
Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDA-PMFVVGVNEKEY 491
            IKIGINGFGRIGR+V R A  RDD+E+V +ND  I  +YM YM KYDS HG++    ++VKD   ++ G K + V   R+P  + W   G +  VE+TG+F                VV++ PSKDA PMFV GVN   Y
Sbjct:    3 IKIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRF-DGTVEVKDGNLVVNG-KTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGVNFNAY 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.927e-24
Identity = 61/140 (43.57%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD-APMFVVGVNEKEY 491
            IK+GINGFGRIGR+V R A +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W + G + V E+TG+F                VV++ PSKD  PMFV G N  +Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3P1_SYNY35.418e-2744.83Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]
G3P_RALSO9.242e-2747.22Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3P1_ANAVT1.335e-2542.07Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P1_ANASP1.335e-2542.07Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_LACDT8.650e-2551.30Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_BUCAP8.650e-2542.66Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3PC_TRYBB8.650e-2543.36Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P1_ESCF38.650e-2543.57Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_HAEIN1.130e-2445.71Glyceraldehyde-3-phosphate dehydrogenase OS=Haemop... [more]
G3P1_SHIFL1.927e-2443.57Glyceraldehyde-3-phosphate dehydrogenase A OS=Shig... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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