EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.379e-20
Identity = 57/147 (38.78%), Postives = 85/147 (57.82%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNEKEYKPE 500
            K+K+ INGFGRIGR   R    R D  +++V VND        +++ KYDS+ G +K  ++K+ D +T+    K + V   R+P ++PWA+ G + V+E TGVF D              V+I+AP+K  D P +VVGVNE++Y  E
Sbjct:   54 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSMLGTFKA-DVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYSHE 198          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 3.184e-19
Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNEKEY 491
            K+K+ INGFGRIGR   R    R D  +E+V +ND        +++ KYDS+ G +K  E+K+ D +T+    K + V   R+P ++PWA+ G + V+E TGVF D              V+I+AP+K  D P +V+GVNE++Y
Sbjct:   81 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFKA-EVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVIITAPAKGADIPTYVMGVNEQDY 222          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.184e-19
Identity = 49/144 (34.03%), Postives = 86/144 (59.72%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEYKPE 500
            K+K+ INGFGRIGR+V R A+  D +++VA+N  + S + + ++ KYD++HG  ++++  V  E +L+   K V +   R+P+++PW +   + VVE+TG F                V+++AP K+  +  V+GVNE ++  E
Sbjct:    2 KVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASY-SAETLAHLIKYDTIHG--RYDKEVVAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKFNAKDKAMGHIEAGAKKVILTAPGKNEDVTIVMGVNEDQFDAE 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.093e-19
Identity = 54/156 (34.62%), Postives = 87/156 (55.77%), Query Frame = 3
Query:   45 SIISMAGDKKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPS--KDAPMFVVGVNEKEYKPE 500
            +++ +  +KKI++ INGFGRIGR   R    R +  +++VA+ND        +++ KYDS  G +   ++K+ D+  +    K + +   R+P ++PW +   + V+E TGVF D              V+I+AP+  KD P FVVGVNE +YK E
Sbjct:   28 AVVDVRAEKKIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSG-GVKQASHLLKYDSTLGTFAA-DVKIVDDSHISVDGKQIKIVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLITAPAKDKDIPTFVVGVNEGDYKHE 181          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.580e-18
Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   60 AGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM--FVVGVNEK 485
            A ++ IK+ INGFGRIGRLV R  L + +VE+VA+ND     + + ++ KYDS HG+ K  ++ VK +  L    K V VF  ++P+ +PW +   + V+ESTG F                V+ISAP+K+  +   V  VN K
Sbjct:    3 AKNRTIKVAINGFGRIGRLVFRSLLSKANVEVVAIND-LTQPEVLAHLLKYDSAHGELK-RKITVK-QNILQIDRKKVYVFSEKDPQNLPWDEHDIDVVIESTGRFVSEEGASLHLKAGAKRVIISAPAKEKTIRTVVYNVNHK 143          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_STRAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces arenae GN=gap PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.520e-18
Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRD-DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVV-GVNEKEYKPE 500
            ++IGINGFGRIGR V R A  R  ++E+VAVND       M ++  YDS+ G++   E    +   +  G++ + V   R+P  +PW   G + V+ESTG+FTD              V+I+AP+      VV GVN+ +Y PE
Sbjct:    3 VRIGINGFGRIGRNVFRAAAARSSELEIVAVND-LGDVPTMAHLLAYDSILGRFP--EEVTAEPGAIRVGDRTIKVLAERDPGALPWGDLGVDIVIESTGIFTDAAKARSHVDGGAKKVIIAAPASGEDFTVVLGVNDGDYDPE 143          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.338e-17
Identity = 54/145 (37.24%), Postives = 83/145 (57.24%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQ--RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVV-GVNEKEYKPE 500
            +K+ INGFGRIGR V R  ++  R D+E+VA+ND     +   ++F++DSVHG++   E+KV  + T+  G  P+ V   RNP E+P  + G +  +E TG+FT               V++SAP+  A + VV GVN ++   E
Sbjct:    3 VKVAINGFGRIGRNVLRAIIESGRTDIEVVAIND-LGPVETNAHLFRFDSVHGRFP-GEVKVAGD-TIDVGRGPIKVTAVRNPAELPHKELGVDIALECTGIFTSRDKAAAHLAAGAKRVLVSAPADGADLTVVYGVNHEKLTNE 144          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.338e-17
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEYKPE 500
            K+++GINGFGR+GRL  R A    ++E V +N+         ++ K+DSVHG+W   E++ + E+ L+ G  P++   +  P+++PW   G + V+E +G F                V+++AP K+  +  V+GVN+  Y+PE
Sbjct:    2 KVRVGINGFGRMGRLALRAAWDWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWT-PEVEAEGERVLIDG-TPLSFSEYGKPDDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPE 143          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.338e-17
Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMT--YMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAP-MFVVGVNEKEY 491
            I++ INGFGRIGR  AR  L R++  +ELVAVND   ++D  T  ++ KYDS+ G+ K+ ++   D    + G K +     RNPE +PW +   + ++ESTGVFT               V+I+AP K+    FV+GVN  +Y
Sbjct:    2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVND---TSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNG-KTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHVNAGAKKVLITAPGKNEDGTFVIGVNHHDY 141          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.747e-17
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEYKP 497
            +K+GINGFGRIGR V R+   R  VE+  +ND       + ++ KYDS++ ++        D++ L    K +     ++P+EIPWA+ G   V+ESTGVFTD              V+I+AP+K   +  V+GVN + Y P
Sbjct:    1 MKVGINGFGRIGRQVFRILHSRG-VEVALIND-LTDNKTLAHLLKYDSIYHRFPGEV--AYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDP 138          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3PB_TOBAC8.379e-2038.78Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_ARATH3.184e-1938.89Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3P2_BACSU3.184e-1934.03Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Baci... [more]
G3PA_CHLRE7.093e-1934.62Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P_MYCGE1.580e-1838.19Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P_STRAE3.520e-1837.50Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_XANFL1.338e-1737.24Glyceraldehyde-3-phosphate dehydrogenase OS=Xantho... [more]
G3P3_ANASP1.338e-1732.64Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anab... [more]
G3P2_ANAVT1.338e-1738.89Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anab... [more]
G3P_THEAQ1.747e-1736.62Glyceraldehyde-3-phosphate dehydrogenase OS=Thermu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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