EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9247 contig Csv1_Contig9247:14..514. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.727e-57
Identity = 107/140 (76.43%), Postives = 117/140 (83.57%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHG WKH+++ +KD KTLLFG+KPV VFG RNPEEIPW + GAEYVVESTGVFTD              VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGHWKHSDITLKDSKTLLFGDKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 3.847e-57
Identity = 108/143 (75.52%), Postives = 118/143 (82.52%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            K+KIGINGFGRIGRLVARVAL  DD+ELVAVNDPFI+T+YMTYMFKYDSVHGQWK +ELKVKD KTLLFG+KP+ VFG RNPEE PW + GAEYVVESTGVFTD              VVISAPS +APMFVVGVNEKEYK +
Sbjct:    2 KMKIGINGFGRIGRLVARVALMSDDIELVAVNDPFITTEYMTYMFKYDSVHGQWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSGNAPMFVVGVNEKEYKKD 144          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.120e-51
Identity = 97/148 (65.54%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   57 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            M G  KIK+GINGFGRIGRLVARVAL+RDD+ELVA+NDPFI+ +YMTYMFKYDS HGQWK  E+ +  E  L FG  PVAV+  R+P EIPW K GA++VVESTGVFTD              VVISAPSKDAPMFV+GVNE +Y  E
Sbjct:    1 MVGSAKIKVGINGFGRIGRLVARVALERDDIELVAINDPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVMGVNENKYSDE 148          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 7.525e-45
Identity = 86/113 (76.11%), Postives = 92/113 (81.42%), Query Frame = 3
Query:  162 VNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            VNDPFI+TDYMTYMFKYD+VHGQWKH+E+KVKD KTLLFGEK VAVFG RNPEEIPWA  GAEYVVESTGVFTD              V+ISAPSKDAPMFV GVNEKEYK +
Sbjct:    1 VNDPFITTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPSKDAPMFVCGVNEKEYKSD 113          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.469e-40
Identity = 82/141 (58.16%), Postives = 102/141 (72.34%), Query Frame = 3
Query:   78 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            K+GINGFGRIGR+V R AL+  D+++VA+NDPFI  DYM YMFKYDS HG++K  +++ KD K ++ G KP++VFG R+P  IPW K GA+YVVESTGVFT               V+ISAPS DAPMFV GVN + YKPE
Sbjct:    4 KVGINGFGRIGRIVLRNALEHGDIDVVAINDPFIDLDYMVYMFKYDSTHGRFK-GKVETKDGKLVIEG-KPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKPE 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.243e-39
Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            I IGINGFGRIGRLV R+ALQR D+++VAVNDPFI+ +Y  YMFKYDS HG++K  E+  KD+  ++ G+  + VFG ++P  IPW K G +YV+ESTGVFT               V+I+APS DAPMFVVGVNE++Y P+
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSDIKVVAVNDPFIAPEYAAYMFKYDSTHGRYK-GEVTSKDDSLVIDGQS-IKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSSDAPMFVVGVNEQKYTPD 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 4.725e-39
Identity = 83/142 (58.45%), Postives = 98/142 (69.01%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            +K+GINGFGRIGR+V R A++  D+E+VAVNDPFI  DYM YMFKYDS HG++K   ++VKD K L    K +AVFG ++P  I W + GAEYVVESTGVFT               VVISAPS DAPMFV GVN   YKPE
Sbjct:    3 VKVGINGFGRIGRIVLRNAIEHGDLEVVAVNDPFIDLDYMVYMFKYDSTHGRFK-GSVEVKDGK-LYINNKAIAVFGEKDPANIKWGEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPE 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.171e-39
Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 497
            +K+GINGFGRIGRLV R AL+   VE+VAVNDPFI  DYM YMFK+DSVHG++K   ++ KD K ++ G KP+AVFG R+P  IPW  +GA+YVVESTGVFT               V+ISAPS DAPM+V GVN   Y P
Sbjct:    3 VKVGINGFGRIGRLVIRNALEAQGVEVVAVNDPFIPLDYMVYMFKFDSVHGRYK-GTVEAKDGKLIIAG-KPIAVFGERDPASIPWGASGADYVVESTGVFTTIDKASAHLKGGAKKVIISAPSADAPMYVCGVNLDAYDP 141          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.053e-38
Identity = 82/142 (57.75%), Postives = 100/142 (70.42%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            IK+GINGFGRIGR+V R AL+  +VE+VAVNDPFI T+Y  YMFKYDS HG++K  +++ KD   ++ G K + VFG R+P  IPW K GA+YVVESTGVFT               V+ISAPS DAPMFVVGVN   YKP+
Sbjct:    3 IKVGINGFGRIGRIVLRNALKNPEVEVVAVNDPFIDTEYAAYMFKYDSTHGRFK-GKVEAKDGGLIIDG-KHIQVFGERDPSNIPWGKAGADYVVESTGVFTGKEAASAHLKGGAKKVIISAPSGDAPMFVVGVNLDAYKPD 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.053e-38
Identity = 81/142 (57.04%), Postives = 99/142 (69.72%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            IKIGINGFGRIGRLV RVAL R D+E+VAVNDPFI+ DY  YMFKYDS HG++K  E+    +  ++ G K + VF  R+P  IPW K+G +YV+ESTGVFT               V+I+APS DAPMFVVGVNE +Y P+
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKDIEVVAVNDPFIAPDYAAYMFKYDSTHGRYK-GEVTASGDDLVIDGHK-IKVFQERDPANIPWGKSGVDYVIESTGVFTKVEGAQKHIDAGAKKVIITAPSADAPMFVVGVNEDKYTPD 142          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3PC_MAIZE1.727e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETCR3.847e-5775.52Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA4.120e-5165.54Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_HORVU7.525e-4576.11Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_CRYCU1.469e-4058.16Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_DEBHA1.243e-3955.63Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_CRYNE4.725e-3958.45Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_OMPOL6.171e-3958.16Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_YARLI1.053e-3857.75Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P_CANAL1.053e-3857.04Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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