EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_ZYMMO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomonas mobilis GN=gap PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.136e-15
Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVV-GVNEKE 488
            +K+ INGFGRIGRL AR  L R D  +ELV +ND   S +   ++FK DS HG +        +   ++   K + V   R+P  +P  K G + V+E TG+FT+              V+ISAP+K D    VV GVN K+
Sbjct:    3 VKVAINGFGRIGRLAARAILSRPDSGLELVTIND-LGSVEGNAFLFKRDSAHGTYPGT--VTTEGNDMVIDGKKIVVTAERDPANLPHKKLGVDIVMECTGIFTNTEKASAHLTAGAKKVLISAPAKGDVDRTVVYGVNHKD 141          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_ENTAE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Enterobacter aerogenes GN=gap PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.789e-15
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  114 LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD-APMFVVGVNEKEY 491
            +V R A +R D+E+V +ND  +  +YM YM KYDS HG++    ++VKD   ++ G K + V   ++P  + W + G + V E+TG+F                VV++ PSKD  PMFV G N + Y
Sbjct:    1 IVFRAAQKRSDIEIVGIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFETY 124          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.789e-15
Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 3
Query:   78 KIGINGFGRIGRLV-ARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNE 482
            K+GINGFGRIGRLV  R+   + ++++VA+ND   S   + Y+ K+DS +G +  +    +D  +L+   K +AV+  +  + IPW   GAE +VE TG +T               V+ISAP+ +    V  VN+
Sbjct:    3 KVGINGFGRIGRLVLGRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTIVYNVND 135          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.643e-15
Identity = 52/144 (36.11%), Postives = 75/144 (52.08%), Query Frame = 3
Query:   69 KKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKEY 491
            K++K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +  +   V  +   + G K + V   RNP  +PW + G + V+E TGVF D              V+I+AP K D P +VVGVN   Y
Sbjct:   69 KQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVGVNADAY 210          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.214e-15
Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRD-----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN-PEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEY 491
            +++GINGFGRIGR   R  L +      DVE+VA ND       + ++ K+DS+ G+    ++ ++ + T++ G   +     R  P  +PW   G + VVESTG+FT+              V+ISAP+ D  +  V+GVN+ +Y
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.214e-15
Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRD-----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN-PEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEY 491
            +++GINGFGRIGR   R  L +      DVE+VA ND       + ++ K+DS+ G+    ++ ++ + T++ G   +     R  P  +PW   G + VVESTG+FT+              V+ISAP+ D  +  V+GVN+ +Y
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAAND-ITDNSTLAHLLKFDSILGRLPC-DVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKY 146          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.214e-15
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVN 479
            IK+ ING+GRIGR V R   +   R D+E+VA+ND   +     ++ +YD+VHG++   E+ V  +   + G++ + V   RNP E+PW + G + V+E TG+FT               V+ISAP  KD    +V GVN
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDIEIVAIND-LGNAATNAHLTQYDTVHGRFP-GEVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAPGGKDVDATIVYGVN 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.060e-14
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVN 479
            IK+ ING+GRIGR V R   +   R D+E+VA+ND   +     ++ +YD+VHG++   E+ V  +   + G++ + V   RNP E+PW + G + V+E TG+FT               V+ISAP  KD    +V GVN
Sbjct:    3 IKVAINGYGRIGRNVLRAHYEGGKRHDLEIVAIND-LGNAATNAHLTQYDTVHGRFP-GEVSVDGDAFRVNGDR-IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVN 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.060e-14
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 3
Query:   90 NGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNEKEYK 494
            NGFGRIGR   R    R +  +E++A+ND        +++ KYDS  G++   ++K+ D+  +    K + V   R+P ++PW +   + V+E TGVF D              V+I+AP+K  D P +VVGVN  +YK
Sbjct:    1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSG-GVKQASHLLKYDSTLGKFDA-DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYK 137          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.060e-14
Identity = 53/150 (35.33%), Postives = 78/150 (52.00%), Query Frame = 3
Query:   54 SMAGDKKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM--FVVGVNEKEY 491
            S A   K+++ INGFGRIGR   R    R D  +++V +ND        +++ KYDS+ G +  + +  +D  T+    K + V   RNP E+PW +   + VVE+TGVF D              V+I+AP K   +  FVVGVN+  Y
Sbjct:   74 SNAPSMKVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCINDTS-GVKTASHLLKYDSILGTFDSDVVAGEDSITV--DGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGKGEGVGTFVVGVNDHLY 220          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3P_ZYMMO2.136e-1538.03Glyceraldehyde-3-phosphate dehydrogenase OS=Zymomo... [more]
G3P_ENTAE2.789e-1536.22Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P3_ECOLI2.789e-1535.29Putative glyceraldehyde-3-phosphate dehydrogenase ... [more]
G3PA_PEA3.643e-1536.11Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P_MYCTU6.214e-1533.56Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3P_MYCBO6.214e-1533.56Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3PC_RALEH6.214e-1537.14Glyceraldehyde-3-phosphate dehydrogenase, chromoso... [more]
G3PP_RALEH1.060e-1437.14Glyceraldehyde-3-phosphate dehydrogenase, plasmid ... [more]
G3PA_SCEVA1.060e-1434.53Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_GRAVE1.060e-1435.33Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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