EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 5.260e-14
Identity = 46/144 (31.94%), Postives = 82/144 (56.94%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTD-----XXXXXXXXXXXXXXVVISAPSKD-APMFVVGVNEKE 488
            +K+ INGFGRIGR V ++A +R  +++VA+ND       + ++ KYDS  G + + +++ +D   ++ G + + +   R+P+ +PWAK G + V+ESTGVF+                    V+++ P+KD     V+GVN+ +
Sbjct:    1 MKLAINGFGRIGRNVFKIAFERG-IDIVAIND-LTDPKTLAHLLKYDSTFGVY-NKKVESRDGAIVVDGRE-IKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHD 140          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 8.972e-14
Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 3
Query:   78 KIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISTDYMT--YMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNEKEYKPE 500
            ++ INGFGRIGR   R  L R D  +E+V +ND   ++D  T  ++ +YDS+ G  K +     DE ++    K +     RNP  +PWA+   + V+E+TGVF                V+I+AP K  +   +VVGVN  EYK E
Sbjct:    3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGIND---TSDPRTNAHLLRYDSMLG--KLDADISADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGKGPNIGTYVVGVNAHEYKHE 144          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SHEHH (D-erythrose-4-phosphate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=epd PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.611e-13
Identity = 44/147 (29.93%), Postives = 79/147 (53.74%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARV---ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD--APMFVVGVNEKEYKPE 500
            I++ ING+GRIGR + R    + +RD +++VA+N+     + M ++ +YD+ HG++ H ++K+ D + ++ G+  + +    NP  +PW +   + V E+TGV  D              V+IS PS +      V GVN+   + E
Sbjct:    2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPNPANLPWKELDIDIVYEATGVINDRQECEAHLKAGAKQVLISHPSSNDVDATIVYGVNQDLLRAE 145          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.410e-13
Identity = 46/148 (31.08%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARV---ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK---DAPMFVVGVNEKEYKPE 500
            I++ ING+GRIGR + R    + +RD +++VA+N+     + M ++ +YD+ HG++ H ++K+ D + ++ G+  + +    +P ++PW +   + V E+TGV  D              V+IS PS    DA + V GVN+   K E
Sbjct:    2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPDPAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHPSSSDVDATI-VFGVNQDLLKAE 145          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 3
Query:   78 KIGINGFGRIGRLVARVALQRD-DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPM-FVVGVNEKEYKPE 500
            +I INGFGRIGR V R  L+RD D+++VAVND       +  +  YD+  G+     + V+    ++ G + + V   R P  +PWA+ G + V+E+TG FT               V++SAP+  A +    GVN   Y P+
Sbjct:    3 RIAINGFGRIGRNVLRALLERDSDLDVVAVND-LTEPATLARLLAYDTTSGRLGR-PVTVEGNVLVVDGRR-ITVTAEREPANLPWAELGVDIVLEATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPD 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVF 377
            +K+GINGFGRIGRL  R   + + VE+  +ND       + ++ KYD+  G++K   ++VK++   + G K V V   RNPE+I WA +G E V+E+TG F
Sbjct:    3 VKVGINGFGRIGRLALRRIQEVEGVEVAHIND-LTDPAMLAHLLKYDTTQGRFK-GTVEVKEDGFDVNG-KFVKVTAERNPEDIQWADSGVEIVLEATGFF 100          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13
Identity = 45/147 (30.61%), Postives = 79/147 (53.74%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQR---DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKD--APMFVVGVNEKEYKPE 500
            IK+ INGFGRIGR + R   +    +++++VA+N+     + + ++ KYD+ HG++    +K+ ++   + G+  +A+F   NP E+PW   G + V+E TGV+                V+ S P+ +      V G+N+ E KPE
Sbjct:    3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINE-LADPEAIAHLLKYDTSHGRFFF-PVKLGEDTISVAGDA-IALFCEPNPAELPWKTLGVDVVLECTGVYHSREHAQLHLTAGAKKVLFSHPADNDVDATIVYGINDDELKPE 146          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.296e-12
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   81 IGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKD-EKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNEKE 488
            I ING GRIGR+V R+AL   ++ + A+N  +   + + ++  YD+ HG +   + KV+  E  +      + +   RNPE +PW +   + V+E+TG F                V+++ PSK  D  M V GVN+ +
Sbjct:    5 IAINGMGRIGRMVLRIALNNKNLNVKAINASY-PPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.296e-12
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   81 IGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKD-EKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK--DAPMFVVGVNEKE 488
            I ING GRIGR+V R+AL   ++ + A+N  +   + + ++  YD+ HG +   + KV+  E  +      + +   RNPE +PW +   + V+E+TG F                V+++ PSK  D  M V GVN+ +
Sbjct:    5 IAINGMGRIGRMVLRIALNNKNLNVKAINASY-PPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3P_BORBU5.260e-1431.94Glyceraldehyde-3-phosphate dehydrogenase OS=Borrel... [more]
G3P2_SYNY38.972e-1436.05Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Syne... [more]
E4PD_SHEHH2.611e-1329.93D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHEPA3.410e-1331.08D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P_STRAU4.453e-1334.27Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_LACLA4.453e-1341.58Glyceraldehyde-3-phosphate dehydrogenase OS=Lactoc... [more]
E4PD_PSEHT5.816e-1330.61D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
G3P2_STAES1.296e-1230.94Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAEQ1.296e-1230.94Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P1_STAAW1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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