EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVNEKE 488
            +K+ INGFGRIGRL  R   + + +E+VAVND     D + ++ KYD++ G++   E++V D    + G K V  F   +  ++PW     + V+E TG +TD              V+ISAP+  D    V   N +E
Sbjct:    3 VKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDGGFRVNG-KEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQE 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_TREPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Treponema pallidum GN=gap PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.886e-12
Identity = 48/152 (31.58%), Postives = 73/152 (48.03%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRD----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR-NPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP------SKDAPMFVVGVNEKEYKP 497
            +++ INGFGRIGRLV +   ++     + ++ AV D      Y  Y  KYDSV G+   +     ++   + G +   V G    P ++PW   G E V+E+TG++ +              V+ISAP      SK     V+GVNE E+ P
Sbjct:    1 MRVAINGFGRIGRLVLQAMAEQKLLGKEFDVAAVVDLSTDARYFAYQLKYDSVQGKMGSSLSAPAEDILEVGGHRIKCVCGRGLKPSQLPWKDLGIEVVIEATGIYAN-ESSYGHLEAGAKRVIISAPAKSSDASKPVKTIVMGVNEHEFDP 151          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12
Identity = 46/143 (32.17%), Postives = 79/143 (55.24%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQ--RD-DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK---DAPMFVVGVNEK 485
            IKI ING+GRIGR V R   +  RD ++++VA+N+   + + M ++ ++D+ HG++ H      +  ++L GE  +++F  R+P  +PW   G + V++ TGVF                V+ S P++   DA + V GVN +
Sbjct:    2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINE-LAAPEAMVHLTRFDTSHGRFHHPVQLAGN--SMLVGEDLISLFAERDPSRLPWRALGVDVVLDCTGVFGSRADAELHLAAGAGKVLFSHPAEADVDATI-VYGVNHQ 140          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SHELP (D-erythrose-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=epd PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.432e-11
Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK---DAPMFVVGVNEKEYKPE 500
            IK+ ING+GRIGR + R   +   RD +++VA+N+   + + M ++ +YD+ HG+++       D   +  G+  + +    + E++PW     + V E+TG   D              V+IS PS    DA + V GVN ++ K E
Sbjct:    2 IKVAINGYGRIGRSILRALYESGKRDQIQIVAINE-LANPEAMLHLTQYDTTHGRFQSPASL--DANVMTIGDDRIQLLHEADAEKLPWRSLDIDIVFEATGALIDRQACEAHIRAGAKQVLISHPSSGDVDATI-VYGVNHQDLKAE 145          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.871e-11
Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSK-DAPMFVVGVN 479
            IK+ INGFGRIGRL  R     + +E+VAVND     D + ++ KYD++ G++   E++V +    + G K +  F   +  ++PW     + V+E TG +TD              V+ISAP+K D    V   N
Sbjct:    3 IKVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVIEGGFRVNG-KEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTN 135          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3P1_STAAU1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAS1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAR1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAN1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAM1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAC1.692e-1233.81Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P_TREPA2.886e-1231.58Glyceraldehyde-3-phosphate dehydrogenase OS=Trepon... [more]
E4PD_AERHH8.398e-1232.17D-erythrose-4-phosphate dehydrogenase OS=Aeromonas... [more]
E4PD_SHELP1.432e-1129.73D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P1_STAES1.871e-1133.82Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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