EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9247 contig Csv1_Contig9247:14..514. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SALNS (D-erythrose-4-phosphate dehydrogenase OS=Salmonella newport (strain SL254) GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 3 
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLF-GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 500
            ++I INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ E+  LF G+  + +   R   ++PW + G + V++ TGV+ +              V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
[Close]
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SALHS (D-erythrose-4-phosphate dehydrogenase OS=Salmonella heidelberg (strain SL476) GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 3 
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLF-GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 500
            ++I INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ E+  LF G+  + +   R   ++PW + G + V++ TGV+ +              V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
[Close]
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SALCH (D-erythrose-4-phosphate dehydrogenase OS=Salmonella choleraesuis GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 3 
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLF-GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 500
            ++I INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ E+  LF G+  + +   R   ++PW + G + V++ TGV+ +              V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
[Close]
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: E4PD_SALA4 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella agona (strain SL483) GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.443e-11
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 3 
Query:   75 IKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLF-GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAP-SKDAPMFVV-GVNEKEYKPE 500
            ++I INGFGRIGR V R   +   R ++ +VA+N+       M ++ KYD+ HG++     +V+ E+  LF G+  + +   R   ++PW + G + V++ TGV+ +              V+ S P S D    VV GVN+ + + E
Sbjct:    3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAE 146
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
E4PD_SALNS5.443e-1131.08D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALHS5.443e-1131.08D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALCH5.443e-1131.08D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SALA45.443e-1131.08D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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