EY702109

Overview
NameEY702109
Unique NameEY702109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length502
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.139e-35
Identity = 75/142 (52.82%), Postives = 95/142 (66.90%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            +K+ INGFGRIGRLV R+ALQR  +E+VAVNDPFIS DY  YMFKYDS HG++K  E+       ++ G K +AVF  ++P  +PW K G + V++STGVF +              VVI+APSK APMFVVGVNE +Y  E
Sbjct:    2 VKVAINGFGRIGRLVLRIALQRKALEVVAVNDPFISVDYAAYMFKYDSTHGRYK-GEVTTSGNDLVIDGHK-IAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.406e-35
Identity = 74/139 (53.24%), Postives = 94/139 (67.63%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            +KIG+NGFGRIGRLV R A   D V++VA+NDPFI  +YM YMFKYDS HG++ H  +K ++ K ++ G+  + +F  R+P  I W   GAEYVVESTGVFT               VVISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQ-AITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFVMGVNHEKY 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 7.060e-35
Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            +K+G+NGFGRIGRLV R A   D V++VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+ +F  R+P  I W   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 9.221e-35
Identity = 72/139 (51.80%), Postives = 96/139 (69.06%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            +K+G+NGFGRIGRLV R A+    VE+VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+ +F  R+P  I W + GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN ++Y
Sbjct:    2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 9.221e-35
Identity = 79/141 (56.03%), Postives = 96/141 (68.09%), Query Frame = 3
Query:   78 KIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            KIGINGFGRIGRLV R AL     ++VAVNDPFI+ +YM YMFKYDS HG +K  E+K++D   ++ G+K + VF    PE IPW+K GAEY+VESTGVFT               VVISAPS DAPMFV GVN ++Y  +
Sbjct:    2 KIGINGFGRIGRLVLRAALSCG-AQVVAVNDPFIALEYMVYMFKYDSTHGVFK-GEVKMEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPSADAPMFVCGVNLEKYSKD 139          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 9.221e-35
Identity = 76/143 (53.15%), Postives = 95/143 (66.43%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP---VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 491
            K K+GINGFGRIGRLV R A+++D V++VAVNDPFI+ DYM YMFKYDS HG++K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT               V+ISAPS DAPMFV+GVN   Y
Sbjct:    3 KPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFK-GSVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.204e-34
Identity = 77/142 (54.23%), Postives = 94/142 (66.20%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            +K+GINGFGRIGR+V R A++ +DVE+VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K V     ++P  IPW++TGA YVVESTGVFT               VVISAPS DAPMFV+GVN + YK +
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYKSD 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.204e-34
Identity = 75/142 (52.82%), Postives = 96/142 (67.61%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            +K+GINGFGRIGR+V R A++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  D    + G K V  +  R+P  IPWA+TGA+YV+ESTGVFT               V+ISAPS DAPMFV+GVN + YK +
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSD 142          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.204e-34
Identity = 76/148 (51.35%), Postives = 94/148 (63.51%), Query Frame = 3
Query:   72 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK------PVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKP 497
            K K+GINGFGRIGRL  R A+++D V++VA+NDPFI  DYM YMF YDS HG++     K+      L  EK       + VF  ++P EI WA+ GAEYV+ESTGVFT               VVISAPS DAPM+V+GVNE +Y P
Sbjct:    3 KPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDP 147          
BLAST of EY702109 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.573e-34
Identity = 74/142 (52.11%), Postives = 94/142 (66.20%), Query Frame = 3
Query:   75 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 500
            + I INGFGRIGRLV R+AL+R ++++VA+NDPFIS DY  YMFKYDS HG++K  E+   D   L+   K VAVF  ++P  +PW K G +  V+STGVF +              VVI+APSK APMFVVGVNE +Y  E
Sbjct:    2 VSIAINGFGRIGRLVLRIALERKNIDVVAINDPFISVDYAAYMFKYDSTHGKYK-GEVS-HDGSNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141          
The following BLAST results are available for this feature:
BLAST of EY702109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
G3P1_KLULA4.139e-3552.82Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_TRISI5.406e-3553.24Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]
G3P_RAT7.060e-3551.80Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus... [more]
G3P_MOUSE9.221e-3551.80Glyceraldehyde-3-phosphate dehydrogenase OS=Mus mu... [more]
G3P_HOMAM9.221e-3556.03Glyceraldehyde-3-phosphate dehydrogenase OS=Homaru... [more]
G3P_BRUMA9.221e-3553.15Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P_CURLU1.204e-3454.23Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_COCIM1.204e-3452.82Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P1_GLORO1.204e-3451.35Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]
G3P1_KLUMA1.573e-3452.11Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702109 ID=EY702109; Name=EY702109; organism=Citrus sinensis; type=EST; length=502bp
AGCGAAATCTCACCGTTAAACAAACCTTCACTACTTTCTCATTTTCGATA
ATATCAATGGCCGGAGACAAGAAGATCAAGATCGGAATCAACGGTTTCGG
AAGGATCGGCCGTTTGGTTGCGAGAGTCGCACTCCAGAGGGATGATGTGG
AGCTGGTGGCTGTCAACGATCCTTTCATCTCCACTGATTACATGACATAC
ATGTTTAAGTACGATAGTGTTCACGGTCAGTGGAAGCACAACGAGTTGAA
GGTCAAGGACGAGAAGACCCTCCTCTTCGGTGAGAAGCCAGTCGCTGTTT
TCGGATTCAGGAACCCAGAGGAGATCCCATGGGCAAAGACTGGAGCCGAG
TATGTTGTGGAATCAACTGGAGTGTTCACTGACAAGGACAAGGGTGCTGC
TCACTTGAAGGGTGGTGCCAAGAAGGTCGTTATCTCCGCCCCTAGCAAGG
ATGCTCCCATGTTTGTTGTGGGCGTCAACGAGAAAGAATACAAGCCAGAG
CT
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