EY702108

Overview
NameEY702108
Unique NameEY702108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.494e-25
Identity = 67/214 (31.31%), Postives = 109/214 (50.93%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTGSIHEHV 829
            IG+NYG+  +NLP P  +   ++S     ++LY ADP  +  L+ T + + I   +  I AL+S+   A +W+ +N+LP+YP ++I  + VGNE++  N  N+                   +   IKV T  AM  L  S PPS+G+F  + T   M  +L+FL    S F +N +P+F +  +P   +L F LF        P TG ++ ++
Sbjct:   42 IGINYGRRGNNLPSPYQSINFIKSIKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGI-HNIKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALFQGHSTYTDPQTGLVYRNL 254          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.509e-25
Identity = 66/194 (34.02%), Postives = 99/194 (51.03%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCL 772
            IGVNYG +  +LP P     L ++ +I  +R++  D  +++AL N+G+G+V+G  + D+  LASD + A  W++S V PF  A     I  GNEV+      L+                 + G  + V+T  A SVL  S PPS G+F      T+  I+  L   G+P  +N YP+FAY +DP    L + L
Sbjct:    7 IGVNYGMMGSDLPSPDKVVALYKANNITDVRIFHPDTNVLEALRNSGLGVVLGTLNSDLAPLASDASYAASWVHSYVQPFAGAVSFRYINAGNEVIPGESAALV-----LPAMKNLEAALQAAGLSVPVTTAMATSVLGTSYPPSQGTFSEAALPTVGPIVSHLASSGTPLLVNVYPYFAYSADPSSVRLDYAL 195          

HSP 2 Score: 21.9422 bits (45), Expect = 2.509e-25
Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 3
Query:  813 QYMNMFDAQVDAGHQP*MAVGSG 881
            +Y NMFDA +DA +      G G
Sbjct:  210 EYANMFDAILDAVYAAVEKAGGG 232          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25
Identity = 65/197 (32.99%), Postives = 107/197 (54.31%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IG+ YG + +NLPP      L ++ +I+++RLY  +   + AL ++G+ +++G  + D+  LA++ ++A QW+  NVL FYP+ KI  I VGNEV  +     L                   L  +IKV+T   M+++  S PPS GSF R D    +   + +L   G+P  +N YP+F++  +PR  +L + LF
Sbjct:   34 IGICYGMMGNNLPPANEVIALYKANNIKRMRLYDPNQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQIKVTTAIDMTLIGNSFPPSKGSF-RSDVRSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPRDISLPYALF 229          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.255e-25
Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKII-LITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP 781
            IGV YG +A+NLPP     +L +S  I  +R+Y   P  I+AL  +G+ +++G ++ D+  LA   +AAT W+++NV P++ A   I  I VGNE+     Q++++                 LGG IKVST     V+  S PPSS  F  Q  M  I + L    +P   N YP+FAY  +PR   L +  F P
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSKGITNMRIYSVQPQAIRALHGSGIRLMLGTTNNDVAVLAGSLSAATSWVHANVKPYHSAGVTIRYIAVGNEITGGAAQSILA----AMRNLNKALAAARLGG-IKVSTAVRFDVITNSFPPSSAVF-AQPYMVDIARHLASTNAPLLANVYPYFAYSGNPRDIKLNYATFQP 190          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.209e-24
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP 781
            IGVN G    N+P P     LL+S +I ++RLY AD +++ A A+TGV ++I   +  +  ++     A  W+  NV  +YPA+ I  I VG+EV+ S   N  S                +L  +IKVST H+ +++  S PPS   F +     +  +L+FL+  GSP  +N YP+F Y        L + LF P
Sbjct:   23 IGVNIGTEVTNMPSPTQVVALLKSQNINRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTSL-TNAASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQSTGSPLLLNVYPYFDYVQSNGVIPLDYALFQP 218          

HSP 2 Score: 20.7866 bits (42), Expect = 1.209e-24
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  816 YMNMFDAQVDAGH 854
            Y N+FDA VDA +
Sbjct:  234 YTNVFDAIVDAAY 246          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.573e-24
Identity = 67/209 (32.06%), Postives = 111/209 (53.11%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF---HPTRDELTPGT 808
            IGVN G    N+PPP+    LL+S  I  +RLY A+  ++KA ANT + +++G ++ +I  +   P+AA  W+N NV  + P++ I  I VG+EV ++   ++                  +L  K+KVS+  +M ++ +  PPS+ +F      T+  +LQFLK+ GS F +N YP++ Y +      L + LF    P +  + P T
Sbjct:   26 IGVNIGTDLTNMPPPSDIVTLLKSQQITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEV-LTTIPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLSPVKQIVDPNT 233          

HSP 2 Score: 21.9422 bits (45), Expect = 1.573e-24
Identity = 13/34 (38.24%), Postives = 17/34 (50.00%), Query Frame = 3
Query:  816 YMNMFDAQVDAGHQP*MAVG-SGCPDCGCKNRWP 914
            Y +MFDA VDA +    A+  S  P    +  WP
Sbjct:  237 YNSMFDAMVDAAYYSMEALNFSKIPVVVTETGWP 270          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.048e-23
Identity = 63/195 (32.31%), Postives = 98/195 (50.26%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP 781
            IGV YG + +NLP  +   +L +S  I  +R+Y AD   + AL N+G+G+++   +  +  +A+  + A  W+ +NV P+YPA  I  I  GNEV     Q+++                    G IKVST      +A S PPS+G F +   M  + + L   G+P   N YP+FAY+ +P   +L +  F P
Sbjct:   29 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGGATQSILPAMRNLNAALSAAGL-----GAIKVSTSIRFDEVANSFPPSAGVF-KNAYMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQP 217          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.788e-23
Identity = 66/197 (33.50%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + +NLP  +   +L +S +I++LRLY  +   + AL  + + +++G  + D+  ++S    A  W+  NV  F+P  KI  I VGNE+  ++   NL                   LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   27 IGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 222          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.335e-23
Identity = 66/197 (33.50%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            +GV YG + +NLP  +   +L +S +I +LRLY  +   + AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++   +L S                 LG  IKVST   M+++  S PPS GSF R D       I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   27 LGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNQGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSF-RNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALF 222          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.049e-23
Identity = 67/197 (34.01%), Postives = 102/197 (51.78%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + +NLP      +L +S +I +LRLY  +   ++AL  + + +++G  + D+  +AS    A  W+  NV  F+P  KI  I VGNE+  ++    L S                 LG  IKVST   M+++  S PPS GSF R D    +  I+ FL+D  +P  +N YP+F+Y  +P   +L + LF
Sbjct:   35 IGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSF-RNDARWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLF 230          
The following BLAST results are available for this feature:
BLAST of EY702108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
EA6_ARATH2.494e-2531.31Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E13F_HORVU2.509e-2534.02Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
E13B_PEA3.258e-2532.99Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13D_HORVU4.255e-2535.71Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E133_ARATH1.209e-2433.50Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E134_ARATH1.573e-2432.06Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E13B_HORVU1.048e-2332.31Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E13B_SOLLC1.788e-2333.50Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E132_SOLTU2.335e-2333.50Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13E_TOBAC3.049e-2334.01Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702108 ID=EY702108; Name=EY702108; organism=Citrus sinensis; type=EST; length=930bp
ATGGACGCCTGCGGTACCGGTCCGGAATCCCTCCACAACCACGCGTCCGC
AAGCAACAATCACCACAACAAATTTCACTTTCTTCTCCATCTATTTCTCT
CTGTCCATGGCCAAGTCCAACCCCAACTCCTCACTCTTCCTCTTCGTCTC
TCTCCTCCTTTTTCAAGTTCTTCACTTCTCAAGTTCGCAGTCATTCATCG
GAGTGAACTACGGCCAAGTAGCGGATAACCTGCCCCCGCCGGCGGCTACA
GCGAAGCTTCTGCAATCGACTTCTATACAGAAATTGAGGCTCTACGGTGC
AGATCCGGCCATCATCAAAGCACTAGCAAACACTGGGGTTGGTATTGTAA
TTGGCGCTTCCAGTGGAGATATTCCGGCTCTCGCTTCTGATCCTAACGCC
GCTACTCAGTGGATCAACTCAAACGTGTTGCCTTTTTACCCCGCCAGCAA
AATAATTCTCATCACCGTTGGGAATGAGGTGATGATATCAAATGACCAAA
ATCTAATCAGTCAGCTTCTTCCGGCAATGGCAAATATGCAAAACGCTCTT
AACGCGGCCTCACTTGGTGGGAAAATTAAGGTGTCAACGGTTCATGCGAT
GTCCGTGTTGGCACAATCCGACCCGCCGTCCTCCGGGTCATTCATCCGCC
AAGACACTATGAGAGGGATTTTGCAGTTTCTTAAAGACCACGGCTCCCCT
TTTACCATCAACCCGTACCCGTTTTTCGCTTATCAAAGTGACCCGAGACC
CGAGACTCTTGCCTTCTGTTTGTTTCACCCAACGCGGGACGAGTTGACTC
CCGGAACGGGATCAATACATGAACATGTTCGACGCCCAGGTTGATGCTGG
ACATCAACCTTGAATGGCAGTGGGGTCAGGATGTCCAGATTGTGGGTGCA
AAAACAGGTGGCCTTACGCGGAAACCCGAT
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