EY702108

Overview
NameEY702108
Unique NameEY702108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.914e-17
Identity = 54/167 (32.34%), Postives = 88/167 (52.69%), Query Frame = 2
Query:  284 LRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXS-LGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT--MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            +R+Y  +   ++AL  +G+ +++   +  + +LASD +AA+ W+ +NV+ +    K   I VGNEV+ +      +Q               + L G+IKVST    SVL  S PPS+GSF    +  +  I+ FL ++GSP   N YP+F+Y  D +   L + LF
Sbjct:    1 MRIYDPNSDTLQALKGSGIELILDVPNTSLQSLASDASAASTWVQNNVVNYASDVKFRYIAVGNEVLPTGSNAQYAQYVLPAMKNVQSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSDASSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALF 167          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.265e-17
Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXS-LGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG++A+NLP      KL  S +I+K+R+Y  +  +  AL  + + I++   + D+ ALA +P+    W+  N+   +P  K   I VGNEV    D    ++               + L  +IKVST   + +L  + PP    F  +    +  I+ FL  H  P   N YP+F +  D  P  L + LF
Sbjct:   26 IGVCYGKIANNLPSDQDVIKLYNSNNIKKMRIYFPETNVFNALKGSNIEIILDVPNQDLEALA-NPSKRQGWVQDNIRNHFPDVKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVSTATYLGLLTNTYPPRDSIFRDEYKSFINPIIGFLSRHNLPLLANIYPYFGHADDNVP--LPYALF 218          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.764e-16
Identity = 59/204 (28.92%), Postives = 101/204 (49.51%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPAS---KIILITVGNEVMISNDQNLISQ-XXXXXXXXXXXXXXXSLGGKIKVSTVHAM-SVLAQSDPPSSGSFIRQD---TMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPT 784
            +G+N+G  A +  PP+   +LL+S  I K++L+ ADP +++AL+ + +G+ IG  +  + +L +    A  W++ NV  ++      +I  + VG E  + +  N                    +L  ++KV    +  S L++S  PSSG F R D   TM  +L FL  H SPF +   PF ++  + +  +L F LF  T
Sbjct:   26 VGINWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHF-RADLNKTMIELLSFLTKHHSPFFVTISPFLSFHQN-KNISLDFSLFKET 227          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.514e-16
Identity = 64/210 (30.48%), Postives = 94/210 (44.76%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEV---------MISNDQNLISQXXXXXXXXXXXXXXXSLGG--KIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQ----FLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP 781
            IGV +GQ+ +N+P P+    + +  SI ++R+YG +P  + AL  + +  ++   +GD+  LA     A  W+  NV   Y   +   I+VGNEV         +I   QN+                  S  G   IKVST   M     + PPS G F  +D  R  LQ    FL +  SP  +N Y +F Y +  R  +L F L  P
Sbjct:   27 IGVCFGQMGNNIPNPSEVVAMFKQYSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQK-YNDVRFKYISVGNEVKPGEPGAAALIQAMQNI--------------DRALSAAGLSNIKVSTTTFMGPSRNTYPPSRGRF--KDEYRNFLQPVIGFLVNKRSPLLVNIYTYFGYMN--RDVSLQFALLQP 217          

HSP 2 Score: 21.1718 bits (43), Expect = 7.514e-16
Identity = 11/35 (31.43%), Postives = 18/35 (51.43%), Query Frame = 3
Query:  813 QYMNMFDAQVDAGHQP*MAVGSGCPD-CGCKNRWP 914
            +Y+N FDA +D+ +      G G  D    ++ WP
Sbjct:  231 RYLNFFDANLDSVYAALEKSGGGSLDVVVSESGWP 265          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15
Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = 2
Query:  200 GVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFA 730
            GV YG+  + LP PA    L    +I+++R+Y  D   ++AL  + + +++G  + D+  +A+    A  W+ +NV   Y   K   I VGNEV  ++ +   +                  LG +IKVST     +   + PPS+G F   +RQ  +  I+ FL  + +P  +N YP+FA
Sbjct:   27 GVCYGRQGNGLPSPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVRN-YGNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQ-FIEPIINFLVTNRAPLLVNLYPYFA 205          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 53/189 (28.04%), Postives = 93/189 (49.21%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIIL--ITVGNEVMISN-DQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDP-PSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDP 745
            IG N+G  A +  PP    ++L+   IQK++L+ A+   ++AL  +G+ +++G  +  +  LAS   AA +W+  NV        + +  + VGNE  +S  + + +S                 L  ++KV+      V   S   PS G F    +D M  I++FL ++G PFT+N YP+ +  ++P
Sbjct:   22 IGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRANIRDLMITIVKFLSENGGPFTVNIYPYISLYTNP 210          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12
Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNV--LPFYPASKIILITVGNEVMI-SNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVL---AQSDPPSSGSFIRQD---TMRGILQFLKDHGSPFTINPYPFFA-YQSDPRPETLAF 766
            +GVN+G +A +  PP    ++L+  +I K++L+ AD   + ALA +G+ +++   +  +  + S  + A  W+  NV    F     I  + VGNE  + S + + I+                 LG  +K +      V    A +  PS+G F R D    M  I+ FL  + +P TIN YPF + Y +D  P   AF
Sbjct:   25 LGVNWGTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQLKVMTS-YDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRF-RPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGNDDFPLNYAF 222          
The following BLAST results are available for this feature:
BLAST of EY702108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
E13B_VITVI1.914e-1732.34Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13A_SOLLC4.265e-1730.10Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E139_ARATH2.764e-1628.92Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E13B_BRACM7.514e-1630.48Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E13H_TOBAC1.792e-1529.28Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E136_ARATH3.992e-1528.04Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E138_ARATH5.395e-1228.50Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702108 ID=EY702108; Name=EY702108; organism=Citrus sinensis; type=EST; length=930bp
ATGGACGCCTGCGGTACCGGTCCGGAATCCCTCCACAACCACGCGTCCGC
AAGCAACAATCACCACAACAAATTTCACTTTCTTCTCCATCTATTTCTCT
CTGTCCATGGCCAAGTCCAACCCCAACTCCTCACTCTTCCTCTTCGTCTC
TCTCCTCCTTTTTCAAGTTCTTCACTTCTCAAGTTCGCAGTCATTCATCG
GAGTGAACTACGGCCAAGTAGCGGATAACCTGCCCCCGCCGGCGGCTACA
GCGAAGCTTCTGCAATCGACTTCTATACAGAAATTGAGGCTCTACGGTGC
AGATCCGGCCATCATCAAAGCACTAGCAAACACTGGGGTTGGTATTGTAA
TTGGCGCTTCCAGTGGAGATATTCCGGCTCTCGCTTCTGATCCTAACGCC
GCTACTCAGTGGATCAACTCAAACGTGTTGCCTTTTTACCCCGCCAGCAA
AATAATTCTCATCACCGTTGGGAATGAGGTGATGATATCAAATGACCAAA
ATCTAATCAGTCAGCTTCTTCCGGCAATGGCAAATATGCAAAACGCTCTT
AACGCGGCCTCACTTGGTGGGAAAATTAAGGTGTCAACGGTTCATGCGAT
GTCCGTGTTGGCACAATCCGACCCGCCGTCCTCCGGGTCATTCATCCGCC
AAGACACTATGAGAGGGATTTTGCAGTTTCTTAAAGACCACGGCTCCCCT
TTTACCATCAACCCGTACCCGTTTTTCGCTTATCAAAGTGACCCGAGACC
CGAGACTCTTGCCTTCTGTTTGTTTCACCCAACGCGGGACGAGTTGACTC
CCGGAACGGGATCAATACATGAACATGTTCGACGCCCAGGTTGATGCTGG
ACATCAACCTTGAATGGCAGTGGGGTCAGGATGTCCAGATTGTGGGTGCA
AAAACAGGTGGCCTTACGCGGAAACCCGAT
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