EY702104

Overview
NameEY702104
Unique NameEY702104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6288 contig Csv1_Contig6288:549..1463. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA6_PONAB (Protein disulfide-isomerase A6 OS=Pongo abelii GN=PDIA6 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  348 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYXGDRTKEDIV 626
            DS    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +    + ++G+PT+         V Y G RT+ DIV
Sbjct:  168 DSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 262          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA6_HUMAN (Protein disulfide-isomerase A6 OS=Homo sapiens GN=PDIA6 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  348 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYXGDRTKEDIV 626
            DS    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +    + ++G+PT+         V Y G RT+ DIV
Sbjct:  168 DSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIV 262          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA5_RAT (Protein disulfide-isomerase A5 OS=Rattus norvegicus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11
Identity = 42/146 (28.77%), Postives = 68/146 (46.58%), Query Frame = 3
Query:  234 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV--VIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYXGDRTKEDIVDFIENTGTKLPP 662
            A+ I  W+K  +    PP  +                 D   D       +VL+ F+APWCGHCKK+ P  +  A     DA+   V+A  DAT N+   + F +  +PT+ +F++   + VP    RTK+  +++++N     PP
Sbjct:  247 AEDIVEWLKNPQ----PPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATINEALAERFHISAFPTLKYFKNGEQQAVPAL--RTKKKFIEWMQNPEAPPPP 386          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA5_MOUSE (Protein disulfide-isomerase A5 OS=Mus musculus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11
Identity = 42/146 (28.77%), Postives = 67/146 (45.89%), Query Frame = 3
Query:  234 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV--VIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYXGDRTKEDIVDFIENTGTKLPP 662
            A+ I  W+K      +PP  +                 D   D       +VL+ F+APWCGHCKK+ P  +  A     DA+   V+A  DAT N+     F +  +PT+ +F++   + VP    RTK+  +++++N     PP
Sbjct:  247 AEDIVEWLKN----PLPPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATVNEALAGRFHISAFPTLKYFKNGEQQAVPAL--RTKKKFIEWMQNPEAPPPP 386          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA6_MESAU (Protein disulfide-isomerase A6 OS=Mesocricetus auratus GN=PDIA6 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 3
Query:  348 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYXGDRTKEDIV 626
            D+    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +  + + ++G+PT+         V Y G RT+ DIV
Sbjct:  168 DTFDKNVLDSDDVWMVEFYAPWCGHCKNLEPEWATAATEVKEQTKGKVKLAAVDATVNQVLANRYGIRGFPTIKIFQKGEAPVDYDGGRTRSDIV 262          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA6_RAT (Protein disulfide-isomerase A6 OS=Rattus norvegicus GN=Pdia6 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  348 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYXGDRTKEDIV 626
            D+    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +    + ++G+PT+         V Y G RT+ DIV
Sbjct:  168 DTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIV 262          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA6_MOUSE (Protein disulfide-isomerase A6 OS=Mus musculus GN=Pdia6 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 3
Query:  348 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVA--VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYXGDRTKEDIV 626
            D+    V +S    ++EFYAPWCGHCK L P     A  V  Q    V +A  DAT N +    + ++G+PT+         V Y G RT+ DIV
Sbjct:  168 DTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIV 262          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: TXND5_MOUSE (Thioredoxin domain-containing protein 5 OS=Mus musculus GN=Txndc5 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.620e-11
Identity = 34/112 (30.36%), Postives = 58/112 (51.79%), Query Frame = 3
Query:  384 NVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYXGDRTKEDIVDFIEN--TGTKLPPRKL*KRNLXXMSSRRNG 713
            N  ++F+APWCGHCK LAP  +++A+  ++   V I K D T +       +V+GYPT+ +     K   Y G R  E + D++++   G++  P  +       M++   G
Sbjct:  193 NHFIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLESLRDYVQSQLQGSEAAPETVEPSEAPVMAAEPTG 304          
BLAST of EY702104 vs. ExPASy Swiss-Prot
Match: PDIA5_HUMAN (Protein disulfide-isomerase A5 OS=Homo sapiens GN=PDIA5 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.620e-11
Identity = 42/146 (28.77%), Postives = 68/146 (46.58%), Query Frame = 3
Query:  234 ADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADV--VIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYXGDRTKEDIVDFIENTGTKLPP 662
            A+ I  W+K  +    PP  +                 D   D       +VL+ F+APWCGHCKK+ P  ++ A +   +AD   V+A  DAT N    + F +  +PT+ +F++     VP    RTK+  +++++N     PP
Sbjct:  249 AEDIVEWLKNPQ----PPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFEKAAEALHGEADSSGVLAAVDATVNKALAERFHISEFPTLKYFKNGEKYAVPVL--RTKKKFLEWMQNPEAPPPP 388          
The following BLAST results are available for this feature:
BLAST of EY702104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
PDIA6_PONAB2.005e-1138.95Protein disulfide-isomerase A6 OS=Pongo abelii GN=... [more]
PDIA6_HUMAN2.005e-1138.95Protein disulfide-isomerase A6 OS=Homo sapiens GN=... [more]
PDIA5_RAT2.619e-1128.77Protein disulfide-isomerase A5 OS=Rattus norvegicu... [more]
PDIA5_MOUSE2.619e-1128.77Protein disulfide-isomerase A5 OS=Mus musculus GN=... [more]
PDIA6_MESAU3.420e-1137.89Protein disulfide-isomerase A6 OS=Mesocricetus aur... [more]
PDIA6_RAT4.467e-1137.89Protein disulfide-isomerase A6 OS=Rattus norvegicu... [more]
PDIA6_MOUSE4.467e-1137.89Protein disulfide-isomerase A6 OS=Mus musculus GN=... [more]
TXND5_MOUSE7.620e-1130.36Thioredoxin domain-containing protein 5 OS=Mus mus... [more]
PDIA5_HUMAN7.620e-1128.77Protein disulfide-isomerase A5 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702104 ID=EY702104; Name=EY702104; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGGCTATGTTGTTTATCAACTTCAGCAGCGAAGGAACTGAA
CCTATTCAATCAAAGTATCGTGAAGTTGCTGAACAATACAAAGGACAGGG
CATTAGTTTTCTTTTGGGAGACCTTGAGGCTAGTCAAGGTGCCTTCCAGT
ACTTTGGGCTACAAGAGAGCCAAGTACCTCTCATCGTCATTCAGACTAAT
GATGGGCAGAAGTATTTGAAGCCGAACTTGGATGCCGATCAGATTGCACC
TTGGGTGAAGGAATACAAGGAAGGCAAGGTTCCCCCATTCAGAAAGTCTG
AGCCTATCCCTGAAGAGAACAACGAGCCTGTGAAAGTGGTTGTTGCTGAC
AGCCTTCAGGACATGGTTTTCAACTCTGGAAAAAATGTTTTGCTCGAGTT
TTACGCTCCTTGGTGTGGACACTGCAAAAAGTTGGCTCCAATCTTGGATG
AAGTTGCTGTCTCATATCAAAATGATGCTGATGTTGTTATTGCAAAATTT
GATGCAACCGCAAATGATATTCCTGGTGACACCTTTGAAGTCCAAGGTTA
CCCAACCGTGTTCTTCCGATCTGCTAGTGGAAAGACAGTGCCCTATGANG
GGGATAGGACCAAAGAAGATATTGTTGACTTCATTGAAAATACAGGNACA
AAGCTGCCCCCAAGGAAACTGTAAAAGAGAAATCTGGANNAGATGAGCTC
TAGAAGGAATGGGTATGTTTAGAGAGCCGTGCACATAGTCGGTTGGCGCG
TGTTTGGCNGATGNTATACCAAAACTATCAGTGTCGACAAAACATGCCTG
ATGTTCTCCTCCCCCTGTCCATATCCCCCCTATAGCTTTTCTGAAGCATT
TCCCTTTACGATCCTGTCTGTCCCGGGAATAAAGGGGAGGCATTTTGGCA
TTGGAACTGCAA
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