EY702101

Overview
NameEY702101
Unique NameEY702101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.390e-17
Identity = 44/119 (36.97%), Postives = 65/119 (54.62%), Query Frame = 1
Query:   19 VPIIFYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGCPLPGPANCASNPGNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYPLPPPE 369
            +P+  +KN  S    +P ++PM V  +LW  ++WAT GG  KI+WS APF A ++ F+  GC      N   +   WW   +Y  L+  E   Y  VR  ++ YDYC+D  R+ +PP E
Sbjct:  173 IPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSE 290          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.048e-16
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   34 YKNSGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGCPLPGPANCAS--NP---GNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYP-LPPPE 369
            Y++ G A +P  Q M V+++LW A+DWAT+GG  K +W+ APF A  R +    C   G  +     +P    NWW + ++  LTA + T+ + +R   +IYDYC DT+R+  + PPE
Sbjct:  170 YESEGIA-YPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPE 286          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 41/122 (33.61%), Postives = 69/122 (56.56%), Query Frame = 1
Query:   16 PVPIIFYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGCPLPG----PANCASNPGNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYPLPPPE 369
            P+  +   ++  A +P  +PM +Y+T+W+A DWAT GG  K ++  APF A ++ F ++GC +      P +C S+  ++ E+ +Y ++ + +    R  R   + Y YC DT RYP P PE
Sbjct:  173 PIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDC-SDSVDFLESQDYSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPE 292          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.270e-14
Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = 1
Query:   16 PVPIIFYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGC----PLPGPANCASNPGNW-----------WEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYPLPPPE 369
            P+  I  K      +P  +PM +Y+T+W+A  WAT GG   +D++ +PF + ++   ++GC      PG  N  +N GN+             +N+Y  ++  +AT  R  R  ++ Y YC DT RY +PPPE
Sbjct:  181 PIREILRKEEMNGDYPQ-KPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENN-NNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPE 311          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14
Identity = 41/128 (32.03%), Postives = 65/128 (50.78%), Query Frame = 1
Query:   58 FPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGC----------------PLPGPANCASNPGNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYPLP-PPEILARNIN 390
            +P NQPM +Y +LW ADDWATRGGL K +WS+ PF A + +++ E                  P    ++ +S+   W+   + + + +      RWV+   ++Y+YC D  R+    P E  A+N N
Sbjct:  178 YPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSPCSPGDSTSSSSSSTSEWF---SQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVECTAKNKN 302          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.768e-13
Identity = 41/117 (35.04%), Postives = 58/117 (49.57%), Query Frame = 1
Query:   19 VPIIFYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGCPLPGPANCASNPGNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYPLPPPE 369
            VPI  Y     A FP  +PM VY ++W+A DWAT  G  K D+   PF A Y++F + GC     ++C   P +     N + L+  +     W + N L+Y+YC D  R     PE
Sbjct:  180 VPIRTYNRKNEAIFP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSSC--RPPSPAPMRN-RGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPE 292          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13
Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 1
Query:   19 VPIIFYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGCPLPGPAN------CASNPGNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYP 354
            VP+  +K      +P ++PM +++TLW+   WATR G  KIDWS APF   YR +    C    PA       C      W     ++ L   E     W   N++ Y+YC D  R+P
Sbjct:  167 VPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWCPEGTSAW----IHRELDGAELGTVAWAERNYMSYNYCADGWRFP 280          
BLAST of EY702101 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 37/117 (31.62%), Postives = 56/117 (47.86%), Query Frame = 1
Query:   19 VPIIFYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGL*KIDWSKAPFYAYYRHFDIEGCPLPGPANCASNPGNWWEANNYQALTAMEATRYRWVRLNHLIYDYCTDTSRYPLPPPE 369
            +PI  Y     + FP+ +PM +Y ++W+A  WAT  G  K D+   PF A Y +F   GC     A C     + + +     LT  +    RWV+ + ++Y+YC D  R     PE
Sbjct:  184 IPIRRYPKKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSASPYRSG---GLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPE 296          
The following BLAST results are available for this feature:
BLAST of EY702101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
XTH1_ARATH5.390e-1736.97Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH26_ARATH2.048e-1638.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH8.605e-1533.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH3.270e-1432.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH9.514e-1432.03Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH2.768e-1335.04Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ4.722e-1333.05Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH32_ARATH3.384e-1131.62Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702101 ID=EY702101; Name=EY702101; organism=Citrus sinensis; type=EST; length=903bp
TTCCCAAACACGCGTCCGGTGCCCATCATTTTCTACAAAAACAGTGGAAG
GGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCGACGCTGTGGG
AAGCAGATGACTGGGCAACAAGAGGTGGTCTATAGAAAATAGATTGGAGC
AAAGCTCCTTTTTATGCTTATTACAGACACTTTGATATTGAGGGCTGCCC
ACTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAACTGGTGGGAGG
CAAATAATTATCAAGCCCTCACCGCCATGGAAGCAACAAGATACAGATGG
GTTCGTCTCAACCACCTGATCTATGATTATTGCACTGATACATCAAGATA
CCCACTACCCCCACCGGAAATCCTTGCCAGAAATATAAATCAACCCCGCA
AAAAATTAAGCAGGTGGACGGCACTCCATATCCTAATACTCACCTGGATA
ATAACTTCACGAACCCGCCCCTTGTATTATTCCCAATCCCTGAGAAAAGA
CTCTATCCCCTTTTAAGGGACGGGCTTGACGGACATTCTCCTCCCTGCCT
TTCTACACGCATTTGGGAAGGGGCAACTTGGCGCATCCTGCCTCCCCCGC
CCCCTCATATAGCCTCGATTTGACTGAAAGATATTCCGTGCAAAGAAACC
ACCTCCAAACTTTCGATTATCGTCCGGCTGCTACCATCGTNTATTGAACA
CCGTTCATGTCCCTCTTTTGTACATTTTATGTTAACATCTTTCATAACCA
CATAAAAAACAAATCCGCGCAAACCACTAGCCCCACACAAAGCCCCCATT
ATGTGACCACCGCTGGACCAGTTGTTCGCTTGTGTTTGGGTACTCTGGTT
TTTCACATATTTTTTTTGTTGTGTTGTTCTTCCTTTTCTGTGGTGCGTAC
TTC
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