EY702100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.170e-23 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 2 Query: 383 GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E K YP +F+RIIGFDN RQV F Sbjct: 107 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISF 173 HSP 2 Score: 22.3274 bits (46), Expect = 8.170e-23 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QCISF+A KP Sbjct: 167 QVQCISFIAYKP 178
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 8.170e-23 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 2 Query: 383 GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E K YP +F+RIIGFDN RQV F Sbjct: 106 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISF 172 HSP 2 Score: 22.3274 bits (46), Expect = 8.170e-23 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QCISF+A KP Sbjct: 166 QVQCISFIAYKP 177
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.062e-22 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 2 Query: 383 GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E K YP +F+RIIGFDN RQV F Sbjct: 110 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSF 176 HSP 2 Score: 21.9422 bits (45), Expect = 1.062e-22 Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QC+SF+A KP Sbjct: 170 QVQCVSFIAYKP 181
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.063e-22 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 2 Query: 383 GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E K YP +F+RIIGFDN RQV F Sbjct: 106 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSF 172 HSP 2 Score: 21.9422 bits (45), Expect = 1.063e-22 Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QC+SF+A KP Sbjct: 166 QVQCVSFIAYKP 177
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.063e-22 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 2 Query: 383 GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E K YP +F+RIIGFDN RQV F Sbjct: 107 GFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSF 173 HSP 2 Score: 21.9422 bits (45), Expect = 1.063e-22 Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QC+SF+A KP Sbjct: 167 QVQCVSFIAYKP 178
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.384e-22 Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 362 WVA*LQ---KGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 WV L+ +G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E KEYP +F+R+IGFDN RQV F Sbjct: 97 WVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSF 173 HSP 2 Score: 20.7866 bits (42), Expect = 1.384e-22 Identity = 6/12 (50.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QC+SF+ KP Sbjct: 167 QVQCVSFIVEKP 178
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.384e-22 Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 362 WVA*LQ---KGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 WV L+ +G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E KEYP +F+R+IGFDN RQV F Sbjct: 97 WVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSF 173 HSP 2 Score: 20.7866 bits (42), Expect = 1.384e-22 Identity = 6/12 (50.00%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 564 KLQCISFLAAKP 599 ++QC+SF+ KP Sbjct: 167 QVQCVSFIVEKP 178
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.386e-22 Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 383 GWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQV 568 G+++REH+ SPGYYDGRYWTMWKLPM+GC TQV+ EV EV KEYP + RIIGFDN RQV Sbjct: 95 GFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQV 156 HSP 2 Score: 24.2534 bits (51), Expect = 1.386e-22 Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 564 KLQCISFLAAKPPG 605 ++Q +SF+A+KPPG Sbjct: 155 QVQSVSFIASKPPG 168
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS1_FRIAG (Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.425e-22 Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 362 WVA*LQ---KGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 WV L+ +G+V R+++ SPGYYDGRYWTMWKLPM+GCTDA QV+KE E KEYP +F+R+IGFDN RQV F Sbjct: 97 WVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSF 173
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.800e-22 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 374 LQKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 L++G+V+R++ S P YYDGRYWTMWKLPM+GCTD+ QVL+E+ KEYP++F+RIIGFDN RQV F Sbjct: 105 LEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISF 174 HSP 2 Score: 24.2534 bits (51), Expect = 1.800e-22 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 564 KLQCISFLAAKPPG 605 ++QCISF+A KP G Sbjct: 168 QVQCISFIAYKPKG 181 The following BLAST results are available for this feature:
BLAST of EY702100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702100 ID=EY702100; Name=EY702100; organism=Citrus sinensis; type=EST; length=890bpback to top |