EY702100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 197 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 255 HSP 2 Score: 84.7297 bits (208), Expect = 7.572e-16 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 341 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 399 HSP 3 Score: 84.7297 bits (208), Expect = 7.572e-16 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 628 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 686 HSP 4 Score: 84.7297 bits (208), Expect = 7.572e-16 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 771 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 829 HSP 5 Score: 84.7297 bits (208), Expect = 7.572e-16 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 1059 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 1117 HSP 6 Score: 84.7297 bits (208), Expect = 7.572e-16 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 1203 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 1261 HSP 7 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD YWTMWKLPM+GCTDA+QVL+E+ E + YP +VR+ FD+ +QV V F Sbjct: 484 TAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISF 542 HSP 8 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 407 SSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 ++ GYYD RYWTMWKLPM+GCTDA+QVL+E+ E + YP +VR + FD+ +QV V F Sbjct: 916 TAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISF 973
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 2 Query: 410 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQV 568 S GYYD RYWTMWKLPM+GCTD +QVL+EV +P+ ++R++ FDN +QV Sbjct: 92 SAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQV 144
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 2 Query: 419 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QV + F Sbjct: 112 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGF 166
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 2 Query: 419 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QV + F Sbjct: 112 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGF 166
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 2 Query: 419 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 Y D RYWTMWKLPM+GCTDA+QVL E+ K +P +++R++ FD RQV + F Sbjct: 109 YQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGF 163
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 410 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQV + F Sbjct: 107 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGF 164
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 410 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQV + F Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGF 67
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 419 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQV + F Sbjct: 111 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGF 165
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 419 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQV + F Sbjct: 109 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGF 163
BLAST of EY702100 vs. ExPASy Swiss-Prot
Match: RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 419 YYDGRYWTMWKLPMYGCTDATQVLKEVGEVHKEYPHSFVRIIGFDNKRQVAVHQF 583 Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQV + F Sbjct: 100 YQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGF 154 The following BLAST results are available for this feature:
BLAST of EY702100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702100 ID=EY702100; Name=EY702100; organism=Citrus sinensis; type=EST; length=890bpback to top |