EY720403

Overview
NameEY720403
Unique NameEY720403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.698e-52
Identity = 100/155 (64.52%), Postives = 119/155 (76.77%), Query Frame = 1
Query:    7 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDACI 471
            +IVDTTCPWVSKVW TVEKHKK DYTSIIHGKY HEETVAT+SFAGKY+I+ N++EA+YV DYI+ G        +E FL KF KA S G DPD DL  VGIAN  TMLK ETE++GKL E+TM+++     +N+HF SF TICDAT +RQDA +
Sbjct:  151 KIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAQYVADYIING------GNREEFLTKFAKACSAGFDPDRDLERVGIANQTTMLKDETEQIGKLFERTMLQKYSPIELNQHFQSFNTICDATQERQDAML 299          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROM9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=ispH PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.134e-50
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFAGKY+++ +++EA Y+ +YILG         +  F+ KF KA S+G DPD DL  VG+AN  TMLK ETEE+GK+ EKTM+++ G EN+N HF++F TICDAT +RQDA
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYISEYILG------RGNRNEFMNKFAKACSDGFDPDKDLDRVGVANQTTMLKSETEEIGKVFEKTMLKKFGPENLNSHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROMS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=ispH PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.934e-50
Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFAGKY+++ +++EA YV +YILG         +  F+ KF KA S G DPD DL  VG+AN  TMLK ETEE+GK+ E+TM+++ G EN+N HF++F TICDAT +RQDA
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYVSEYILG------KGNRNEFMNKFSKAFSNGFDPDKDLDRVGVANQTTMLKSETEEIGKVFERTMLKKFGPENLNSHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_MICAN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=ispH PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.934e-50
Identity = 97/152 (63.82%), Postives = 116/152 (76.32%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW +VEKHKK D+TSIIHGKY+HEET+AT+SFAG Y+I+ N+ +A YV +YIL G        K  FLEKFK A S+G DPD DL  +GIAN  TMLK ETEE+GKL E TM+R+ G  +  +HF+SF TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNSVEKHKKSDHTSIIHGKYNHEETIATSSFAGTYLIVLNLDQANYVANYILHG------GDKNEFLEKFKNAHSQGFDPDRDLDYIGIANQTTMLKSETEEIGKLFEHTMLRKYGPIDFKDHFMSFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROM0 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=ispH PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.525e-50
Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFAGKY+++ +++EA YV +YILG         +  F+ KF KA S G DPD DL  VG+AN  TMLK ETEE+GK+ E+TM+++ G EN+N HF++F TICDAT +RQDA
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHVFTSIIHGKFKHEETLATSSFAGKYLVVLDLEEANYVSEYILG------RGNRNEFMNKFAKACSNGFDPDKDLERVGVANQTTMLKSETEEIGKVFERTMLKKFGPENLNSHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.298e-50
Identity = 91/152 (59.87%), Postives = 119/152 (78.29%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW TVEKHK+G +TSIIHGKY+HEETVAT+SFA  Y+++ N+++A+YVCDYIL G        ++ F+ +F KA S G DPD DL  +GIAN  TMLK ETE +GKL E+T++++ G + +N+HF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.298e-50
Identity = 91/152 (59.87%), Postives = 119/152 (78.29%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW TVEKHK+G +TSIIHGKY+HEETVAT+SFA  Y+++ N+++A+YVCDYIL G        ++ F+ +F KA S G DPD DL  +GIAN  TMLK ETE +GKL E+T++++ G + +N+HF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNTVEKHKRGAHTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROM5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispH PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.626e-50
Identity = 93/153 (60.78%), Postives = 114/153 (74.51%), Query Frame = 1
Query:    7 QIVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            QI+DTTCPWVSKVW TVEKHKK  +TSIIHGKY HEET+AT SFAG Y+++ ++ EAEYV +YI G         K  F+ KF KA S+G DPDV L  +G+AN  TMLK ETEE+GK  EKTM+ + G  N+N+HF++F TICDAT +RQDA
Sbjct:  151 QIIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATRSFAGNYLVVFDLDEAEYVSNYIQG------HGDKNKFMNKFAKACSDGFDPDVHLERIGVANQTTMLKSETEEIGKFFEKTMLMKYGPANINDHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.348e-50
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK  +TSIIHGKY HEET+AT+SFAG Y++L +++EA YV DYILG         +E FL++F KA S G DPD DL +VG+AN  TMLK ETEE+G+L EKTM++R G   +NEHF++  TICDAT +RQ A
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATSSFAGTYLVLFDLEEANYVSDYILG------KGNREDFLKRFSKASSAGFDPDKDLQKVGVANQTTMLKSETEEIGRLFEKTMLQRFGPAQLNEHFLAINTICDATEERQGA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.348e-50
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK  +TSIIHGKY HEET+AT+SFAG Y++L +++EA YV DYILG         +E FL++F KA S G DPD DL +VG+AN  TMLK ETEE+G+L EKTM++R G   +NEHF++  TICDAT +RQ A
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKYKHEETLATSSFAGTYLVLFDLEEANYVSDYILG------KGNREDFLKRFSKASSAGFDPDKDLQKVGVANQTTMLKSETEEIGRLFEKTMLQRFGPAQLNEHFLAINTICDATEERQGA 297          
The following BLAST results are available for this feature:
BLAST of EY720403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ISPH_NOSP72.698e-5264.524-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM91.134e-5060.534-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROMS1.934e-5060.534-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_MICAN1.934e-5063.824-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM02.525e-5060.534-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP63.298e-5059.874-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNE73.298e-5059.874-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM55.626e-5060.784-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROMT7.348e-5061.844-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM17.348e-5061.844-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-H12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720403 ID=EY720403; Name=EY720403; organism=Citrus sinensis; type=EST; length=845bp
AATGTACAGATTGTTGATACAACTTGCCCTTGGGTGTCTAAGGTCTGGAC
TACTGTGGAGAAGCACAAGAAGGGAGACTACACTTCAATTATTCACGGTA
AATATTCTCATGAGGAAACTGTAGCAACTGCATCGTTTGCAGGAAAGTAT
ATCATACTCAAGAATATGAAAGAGGCTGAGTATGTGTGTGATTACATTCT
TGGGGGTGAACTTAATGGATCTAGCTCAACAAAAGAAGCATTCCTTGAGA
AATTCAAGAAAGCTGTTTCAGAAGGGTGTGATCCAGATGTTGACCTGGTA
GAAGTGGGCATTGCAAACCACCCTACAATGCTCAAGGGTGAGACAGAAGA
GATGGGAAAACTACTCGAGAAGACCATGATGCGTAGATTGGGAGTTGAAA
ATGTCAATGAACACTTCATAAGCTTCACCACCATTTGTGATGCTACTCAC
GACCGACAGGATGCATGTATAGGATGGTTGAGGAACAGGTCGATCCCCTC
CCGGTGGTCGGCTGCGTGGACCGCGACCGATAGGGGACGGCCTCGGGAGA
TGGGGGAAAGCGGCGGGTGGCCGCACGCGGGATGTCCCCTCCCACGAGGG
GGCGCCGCGGGAGCCGCGCCGCGGGCGGGGCGGGCCGCCCAGCGCGGGGG
CGAAGGCGCGCAGCGCGCCACGCCCGCCCCCCGCCCCCCCCCCGGCCCAG
CCGCGCCGGCGGGGGGCGGCGAGGGGGCGGCCGGGACGGGCGGGAGGCGG
GGCCCGGGGCTGGCGGCCCGGGGCCGGGCCCAGCCGGGCCGGCGGCGCCG
GGGCCGGGCGGGCTCGGGGGAGGGCGGCGGGTGGGCGAGGCGCGC
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