EY720403

Overview
NameEY720403
Unique NameEY720403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.596e-50
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK +++SIIHGK  HEET+AT+SFAG Y+++ ++KEA+YV DYILG         ++ FL +F +A S+G DPD DL  +G+AN  TMLK ETEE+G+L EKTM+R+ G   +NEHF++F TICDAT +RQDA
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHEFSSIIHGKVKHEETLATSSFAGTYLVVLDLKEAQYVSDYILG------KGNRDDFLRRFSRASSQGFDPDRDLKRLGVANQTTMLKSETEEIGRLFEKTMLRKYGPAELNEHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.253e-49
Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVWTTVEKHKK  +TSIIHGK  HEET+AT+SFAG Y+++ +++EA  V DYILG         +E+F+E+F KA S G DPD DL  +G+AN  TMLK ETEE+G+L E+TM+ + G  ++NEHF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEARLVADYILG------KGNRESFMERFSKACSPGFDPDRDLEHLGVANQTTMLKSETEEIGRLFERTMLSKYGPTDLNEHFLAFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.253e-49
Identity = 93/152 (61.18%), Postives = 114/152 (75.00%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK  +TSIIHGK+ HEET+AT+SFA KY+++ N++EA YV +YILG         K  FL KF +A S G DPD DL  VG+AN  TMLK ETEE+GK+ EKTM+ + G E +N HF++F TICDAT +RQDA
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKFKHEETLATSSFADKYLVVLNLEEANYVSEYILG------RGNKNHFLNKFAQAFSNGFDPDKDLDRVGVANQTTMLKSETEEIGKVFEKTMLHKFGPEKLNSHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49
Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW +VEKHKK ++TSIIHGKY+HEET+AT+SFAG Y+I+ NM EA+ VCDYIL G        ++ FL+ F  A S G DPD DLV +G+AN  TMLK ETE +GKL EKT++++ G   +N HF+SF TICDAT +RQDA
Sbjct:  125 IVDTTCPWVSKVWNSVEKHKKKEHTSIIHGKYNHEETIATSSFAGTYLIVLNMAEAQKVCDYILHG------GDRQEFLDYFANAHSAGFDPDQDLVRLGVANQTTMLKSETEMIGKLFEKTLLQKYGPIELNNHFMSFNTICDATQERQDA 270          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNR3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain RCC307) GN=ispH PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49
Identity = 90/152 (59.21%), Postives = 121/152 (79.61%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW +VE+HKK  +TS+IHGK  HEET+AT+SFAG Y+++ +++EA+ VCDYILG   NG+   +EAFL++F  A S G DPD DL  +G+AN  TMLK ETE++G+L E+T++RR G  ++N+HF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNSVERHKKNSFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQLVCDYILG---NGN---REAFLKRFAGATSPGFDPDRDLSRIGVANQTTMLKSETEDIGRLFERTLLRRYGPTDLNDHFLAFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            I+DTTCPWVSKVW TVEKHKK ++TSIIHGK  HEET+AT+SFAG Y+++ +++EA+YV +YILG         +E FL++F KA S+G DPD DL  +G+AN  TMLK ETEE+G+L EKTM+R+ G   + EHF++F TICDAT +RQDA
Sbjct:  152 IIDTTCPWVSKVWHTVEKHKKHEFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYVANYILG------KGDREEFLKRFSKASSQGFDPDRDLQRLGVANQTTMLKSETEEIGRLFEKTMLRKYGPAELTEHFLAFNTICDATEERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNSC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9605) GN=ispH PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.124e-49
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW TVEKHKK  +TSIIHGK  HEET+AT+SFAG Y+++ +++EA+YV DYILG   NG    +E F+++F KA S G DPD DL  +G+AN  TMLK ETEE+G+L E+TM+ + G   +N+HF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNTVEKHKKHTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYVADYILG---NGD---REDFIKRFAKACSPGFDPDRDLERLGVANQTTMLKSETEEIGRLFERTMLSKYGPTQLNDHFLAFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9902) GN=ispH PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.124e-49
Identity = 89/152 (58.55%), Postives = 118/152 (77.63%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW TVEKHKK  +TS+IHGK  HEET+AT+SFAG Y+++ +++EA+ V DYILG         +EAF+++F KA SEG DPD DL  +G+AN  TMLK ETEE+G++ E+TM+ + G  ++NEHF+++ TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNTVEKHKKHTFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQIVVDYILG------KGDREAFMQRFAKACSEGFDPDRDLERLGVANQTTMLKSETEEIGRMFERTMLSKYGPADLNEHFLAYNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.087e-48
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVW TVEKHKK  +TSIIHGK  HEET+AT+SFAG Y+++ +++EA+ V DYILG   NG    +++F+ +F KA S G DPD DL ++G+AN  TMLK ETEE+G+L E+TM+ + G   +NEHF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQIVADYILG---NGD---RDSFMARFSKACSPGFDPDQDLEKLGVANQTTMLKRETEEIGRLFERTMLSKFGPTQLNEHFLAFNTICDATQERQDA 297          
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPX (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH8102) GN=ispH PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.032e-48
Identity = 90/152 (59.21%), Postives = 115/152 (75.66%), Query Frame = 1
Query:   10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465
            IVDTTCPWVSKVWTTVEKHKK   TSIIHGK  HEET+AT+SFAG Y+++ +M+EA+ V DYILG         ++AF+++F  A S G DPD DL  +G+AN  TMLK ETEE+G+L E+TM+ + G   +N+HF++F TICDAT +RQDA
Sbjct:  152 IVDTTCPWVSKVWTTVEKHKKHTITSIIHGKVKHEETLATSSFAGTYLVVLDMEEAQIVADYILG------KGDRDAFMQRFSAACSPGFDPDRDLSRLGVANQTTMLKSETEEIGRLFERTMLSKYGPAELNDHFVAFNTICDATQERQDA 297          
The following BLAST results are available for this feature:
BLAST of EY720403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ISPH_PROMA9.596e-5059.874-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNS31.253e-4960.534-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROMP1.253e-4961.184-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNY32.138e-4961.844-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNR32.138e-4959.214-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_PROM42.138e-4959.874-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNSC8.124e-4960.534-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNS98.124e-4958.554-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNPW3.087e-4859.874-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNPX4.032e-4859.214-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-H12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720403 ID=EY720403; Name=EY720403; organism=Citrus sinensis; type=EST; length=845bp
AATGTACAGATTGTTGATACAACTTGCCCTTGGGTGTCTAAGGTCTGGAC
TACTGTGGAGAAGCACAAGAAGGGAGACTACACTTCAATTATTCACGGTA
AATATTCTCATGAGGAAACTGTAGCAACTGCATCGTTTGCAGGAAAGTAT
ATCATACTCAAGAATATGAAAGAGGCTGAGTATGTGTGTGATTACATTCT
TGGGGGTGAACTTAATGGATCTAGCTCAACAAAAGAAGCATTCCTTGAGA
AATTCAAGAAAGCTGTTTCAGAAGGGTGTGATCCAGATGTTGACCTGGTA
GAAGTGGGCATTGCAAACCACCCTACAATGCTCAAGGGTGAGACAGAAGA
GATGGGAAAACTACTCGAGAAGACCATGATGCGTAGATTGGGAGTTGAAA
ATGTCAATGAACACTTCATAAGCTTCACCACCATTTGTGATGCTACTCAC
GACCGACAGGATGCATGTATAGGATGGTTGAGGAACAGGTCGATCCCCTC
CCGGTGGTCGGCTGCGTGGACCGCGACCGATAGGGGACGGCCTCGGGAGA
TGGGGGAAAGCGGCGGGTGGCCGCACGCGGGATGTCCCCTCCCACGAGGG
GGCGCCGCGGGAGCCGCGCCGCGGGCGGGGCGGGCCGCCCAGCGCGGGGG
CGAAGGCGCGCAGCGCGCCACGCCCGCCCCCCGCCCCCCCCCCGGCCCAG
CCGCGCCGGCGGGGGGCGGCGAGGGGGCGGCCGGGACGGGCGGGAGGCGG
GGCCCGGGGCTGGCGGCCCGGGGCCGGGCCCAGCCGGGCCGGCGGCGCCG
GGGCCGGGCGGGCTCGGGGGAGGGCGGCGGGTGGGCGAGGCGCGC
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