EY720403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.596e-50 Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 I+DTTCPWVSKVW TVEKHKK +++SIIHGK HEET+AT+SFAG Y+++ ++KEA+YV DYILG ++ FL +F +A S+G DPD DL +G+AN TMLK ETEE+G+L EKTM+R+ G +NEHF++F TICDAT +RQDA Sbjct: 152 IIDTTCPWVSKVWHTVEKHKKHEFSSIIHGKVKHEETLATSSFAGTYLVVLDLKEAQYVSDYILG------KGNRDDFLRRFSRASSQGFDPDRDLKRLGVANQTTMLKSETEEIGRLFEKTMLRKYGPAELNEHFLAFNTICDATEERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.253e-49 Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVWTTVEKHKK +TSIIHGK HEET+AT+SFAG Y+++ +++EA V DYILG +E+F+E+F KA S G DPD DL +G+AN TMLK ETEE+G+L E+TM+ + G ++NEHF++F TICDAT +RQDA Sbjct: 152 IVDTTCPWVSKVWTTVEKHKKQSFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEARLVADYILG------KGNRESFMERFSKACSPGFDPDRDLEHLGVANQTTMLKSETEEIGRLFERTMLSKYGPTDLNEHFLAFNTICDATQERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.253e-49 Identity = 93/152 (61.18%), Postives = 114/152 (75.00%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 I+DTTCPWVSKVW TVEKHKK +TSIIHGK+ HEET+AT+SFA KY+++ N++EA YV +YILG K FL KF +A S G DPD DL VG+AN TMLK ETEE+GK+ EKTM+ + G E +N HF++F TICDAT +RQDA Sbjct: 152 IIDTTCPWVSKVWHTVEKHKKHTFTSIIHGKFKHEETLATSSFADKYLVVLNLEEANYVSEYILG------RGNKNHFLNKFAQAFSNGFDPDKDLDRVGVANQTTMLKSETEEIGKVFEKTMLHKFGPEKLNSHFLAFNTICDATEERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49 Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVW +VEKHKK ++TSIIHGKY+HEET+AT+SFAG Y+I+ NM EA+ VCDYIL G ++ FL+ F A S G DPD DLV +G+AN TMLK ETE +GKL EKT++++ G +N HF+SF TICDAT +RQDA Sbjct: 125 IVDTTCPWVSKVWNSVEKHKKKEHTSIIHGKYNHEETIATSSFAGTYLIVLNMAEAQKVCDYILHG------GDRQEFLDYFANAHSAGFDPDQDLVRLGVANQTTMLKSETEMIGKLFEKTLLQKYGPIELNNHFMSFNTICDATQERQDA 270
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNR3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain RCC307) GN=ispH PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49 Identity = 90/152 (59.21%), Postives = 121/152 (79.61%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVW +VE+HKK +TS+IHGK HEET+AT+SFAG Y+++ +++EA+ VCDYILG NG+ +EAFL++F A S G DPD DL +G+AN TMLK ETE++G+L E+T++RR G ++N+HF++F TICDAT +RQDA Sbjct: 152 IVDTTCPWVSKVWNSVERHKKNSFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQLVCDYILG---NGN---REAFLKRFAGATSPGFDPDRDLSRIGVANQTTMLKSETEDIGRLFERTLLRRYGPTDLNDHFLAFNTICDATQERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.138e-49 Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 I+DTTCPWVSKVW TVEKHKK ++TSIIHGK HEET+AT+SFAG Y+++ +++EA+YV +YILG +E FL++F KA S+G DPD DL +G+AN TMLK ETEE+G+L EKTM+R+ G + EHF++F TICDAT +RQDA Sbjct: 152 IIDTTCPWVSKVWHTVEKHKKHEFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYVANYILG------KGDREEFLKRFSKASSQGFDPDRDLQRLGVANQTTMLKSETEEIGRLFEKTMLRKYGPAELTEHFLAFNTICDATEERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNSC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9605) GN=ispH PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.124e-49 Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVW TVEKHKK +TSIIHGK HEET+AT+SFAG Y+++ +++EA+YV DYILG NG +E F+++F KA S G DPD DL +G+AN TMLK ETEE+G+L E+TM+ + G +N+HF++F TICDAT +RQDA Sbjct: 152 IVDTTCPWVSKVWNTVEKHKKHTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQYVADYILG---NGD---REDFIKRFAKACSPGFDPDRDLERLGVANQTTMLKSETEEIGRLFERTMLSKYGPTQLNDHFLAFNTICDATQERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9902) GN=ispH PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.124e-49 Identity = 89/152 (58.55%), Postives = 118/152 (77.63%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVW TVEKHKK +TS+IHGK HEET+AT+SFAG Y+++ +++EA+ V DYILG +EAF+++F KA SEG DPD DL +G+AN TMLK ETEE+G++ E+TM+ + G ++NEHF+++ TICDAT +RQDA Sbjct: 152 IVDTTCPWVSKVWNTVEKHKKHTFTSVIHGKVKHEETLATSSFAGTYLVVLDLEEAQIVVDYILG------KGDREAFMQRFAKACSEGFDPDRDLERLGVANQTTMLKSETEEIGRMFERTMLSKYGPADLNEHFLAYNTICDATQERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.087e-48 Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVW TVEKHKK +TSIIHGK HEET+AT+SFAG Y+++ +++EA+ V DYILG NG +++F+ +F KA S G DPD DL ++G+AN TMLK ETEE+G+L E+TM+ + G +NEHF++F TICDAT +RQDA Sbjct: 152 IVDTTCPWVSKVWNTVEKHKKQTFTSIIHGKVKHEETLATSSFAGTYLVVLDLEEAQIVADYILG---NGD---RDSFMARFSKACSPGFDPDQDLEKLGVANQTTMLKRETEEIGRLFERTMLSKFGPTQLNEHFLAFNTICDATQERQDA 297
BLAST of EY720403 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPX (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH8102) GN=ispH PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.032e-48 Identity = 90/152 (59.21%), Postives = 115/152 (75.66%), Query Frame = 1 Query: 10 IVDTTCPWVSKVWTTVEKHKKGDYTSIIHGKYSHEETVATASFAGKYIILKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSEGCDPDVDLVEVGIANHPTMLKGETEEMGKLLEKTMMRRLGVENVNEHFISFTTICDATHDRQDA 465 IVDTTCPWVSKVWTTVEKHKK TSIIHGK HEET+AT+SFAG Y+++ +M+EA+ V DYILG ++AF+++F A S G DPD DL +G+AN TMLK ETEE+G+L E+TM+ + G +N+HF++F TICDAT +RQDA Sbjct: 152 IVDTTCPWVSKVWTTVEKHKKHTITSIIHGKVKHEETLATSSFAGTYLVVLDMEEAQIVADYILG------KGDRDAFMQRFSAACSPGFDPDRDLSRLGVANQTTMLKSETEEIGRLFERTMLSKYGPAELNDHFVAFNTICDATQERQDA 297 The following BLAST results are available for this feature:
BLAST of EY720403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720403 ID=EY720403; Name=EY720403; organism=Citrus sinensis; type=EST; length=845bpback to top |