DR908612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_RANMC (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Ranunculus macranthus GN=ndhG PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 5.511e-15 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQDLI+NSQQIGIHLSTDFFLPFE Sbjct: 122 GIVWTTRSNQIIEQDLINNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.0466 bits (92), Expect = 5.511e-15 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYGI+WTT S Sbjct: 110 SLITTIPDTSWYGIVWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_AETGR (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Aethionema grandiflora GN=ndhG PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.516e-15 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 122 GVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.4318 bits (93), Expect = 5.516e-15 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTT 56 SLI+TILDTSWYG+IWTT Sbjct: 110 SLISTILDTSWYGVIWTT 127
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_AETCO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Aethionema cordifolium GN=ndhG PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.516e-15 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 122 GVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.4318 bits (93), Expect = 5.516e-15 Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTT 56 SLI+TILDTSWYG+IWTT Sbjct: 110 SLISTILDTSWYGVIWTT 127
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_SOLTU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Solanum tuberosum GN=ndhG PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 5.516e-15 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQD +SNSQQIGIHLSTDFFLPFE Sbjct: 122 GIIWTTRSNQIIEQDFLSNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.817 bits (94), Expect = 5.516e-15 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYGIIWTT S Sbjct: 110 SLITTISDTSWYGIIWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_SOLLC (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Solanum lycopersicum GN=ndhG PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 5.516e-15 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQD +SNSQQIGIHLSTDFFLPFE Sbjct: 122 GIIWTTRSNQIIEQDFLSNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.817 bits (94), Expect = 5.516e-15 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYGIIWTT S Sbjct: 110 SLITTISDTSWYGIIWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_SOLBU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Solanum bulbocastanum GN=ndhG PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 5.516e-15 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQD +SNSQQIGIHLSTDFFLPFE Sbjct: 122 GIIWTTRSNQIIEQDFLSNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.817 bits (94), Expect = 5.516e-15 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYGIIWTT S Sbjct: 110 SLITTISDTSWYGIIWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_ATRBE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Atropa belladonna GN=ndhG PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 5.516e-15 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQD +SNSQQIGIHLSTDFFLPFE Sbjct: 122 GIIWTTRSNQIIEQDFLSNSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.817 bits (94), Expect = 5.516e-15 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYGIIWTT S Sbjct: 110 SLITTISDTSWYGIIWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_PLAOC (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Platanus occidentalis GN=ndhG PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 7.168e-15 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQDLISN QQIGIHLSTDFFLPFE Sbjct: 122 GVIWTTRSNQIIEQDLISNGQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.0466 bits (92), Expect = 7.168e-15 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYG+IWTT S Sbjct: 110 SLITTIPDTSWYGVIWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_LOTJA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Lotus japonicus GN=ndhG PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 7.168e-15 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R+NQIIEQDLIS SQQIGIHLSTDFFLPFE Sbjct: 122 GIIWTTRSNQIIEQDLISTSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 40.4318 bits (93), Expect = 7.168e-15 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTTPS 62 SLITTI DTSWYGIIWTT S Sbjct: 110 SLITTIPDTSWYGIIWTTRS 129
BLAST of DR908612 vs. ExPASy Swiss-Prot
Match: NU6C_CARPA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Carica papaya GN=ndhG PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 7.168e-15 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 40 GLFGLHRANQIIEQDLISNSQQIGIHLSTDFFLPFE 147 G+ R NQI+EQDLIS+SQQIGIHLSTDFFLPFE Sbjct: 122 GVIWTTRLNQILEQDLISSSQQIGIHLSTDFFLPFE 157 HSP 2 Score: 41.9726 bits (97), Expect = 7.168e-15 Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3 Query: 3 SLITTILDTSWYGIIWTT 56 SLITTILDTSWYG+IWTT Sbjct: 110 SLITTILDTSWYGVIWTT 127 The following BLAST results are available for this feature:
BLAST of DR908612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908612 ID=DR908612; Name=DR908612; organism=Citrus sinensis; type=EST; length=607bpback to top |