DR908610

Overview
NameDR908610
Unique NameDR908610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGLS_CALSA (Beta-glucosidase A OS=Caldocellum saccharolyticum GN=bglA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13
Identity = 50/146 (34.25%), Postives = 70/146 (47.95%), Query Frame = 3
Query:  231 DFIGINYYGQEVVSGPGLKLVETD--------------EYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET---------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRAT 599
            DF+GINYY + V      +L + +              EY+E G  V+P GLF +L    E Y  +  P  ITENG +            D  R  Y+ +H  A   A+  GV + GY  W++ DN+EWA GY  +FG++ VD  T
Sbjct:  298 DFLGINYYTRAV------RLYDENSSWIFPIRWEHPAGEYTEMGWEVFPQGLFDLLIWIKESYPQI--PIYITENGAAYNDIVTEDGKVHDSKRIEYLKQHFEAARKAIENGVDLRGYFVWSLMDNFEWAMGYTKRFGIIYVDYET 435          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGLB_PAEPO (Beta-glucosidase B OS=Paenibacillus polymyxa GN=bglB PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.901e-13
Identity = 41/138 (29.71%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  231 DFIGINYYGQEVV-SGPGLKLVETDEY------SESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLI--------RRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRAT 599
            DF+GINYY + ++ S     L++ ++       ++ G  ++P+  +++L +  + +    LP +ITENG +   +L+        R  Y+ EHL A +  +  G  + GY  W+  DN+EWA GY  +FG+V ++  T
Sbjct:  291 DFLGINYYTRSIIRSTNDASLLQVEQVHMEEPVTDMGWEIHPESFYKLLTRIEKDFSK-GLPILITENGAAMRDELVNGQIEDTGRHGYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYET 427          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGLS_AGRSA (Beta-glucosidase OS=Agrobacterium sp. (strain ATCC 21400) GN=abg PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12
Identity = 53/147 (36.05%), Postives = 72/147 (48.98%), Query Frame = 3
Query:  216 ISDRLDFIGINYYGQEVVSG---PGLKLVET-------DEYSESGRGVYPDGLFRVLHQFHERYKHLNLP-FIITENGV--------SDETDLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRAT 599
            IS +LD+ G+NYY    V+    PG++   T       D  ++ G  VY   L  ++   +ERY   +LP   ITENG             D  R  Y  EHL  V   +  G P+ GY  W++ DN+EWA+GY  +FGLV VD  T
Sbjct:  287 ISQKLDWWGLNYYTPMRVADDATPGVEFPATMPAPAVSDVKTDIGWEVYAPALHTLVETLYERY---DLPECYITENGACYNMGVENGQVNDQPRLDYYAEHLGIVADLIRDGYPMRGYFAWSLMDNFEWAEGYRMRFGLVHVDYQT 430          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGLA_BACCI (Beta-glucosidase OS=Bacillus circulans GN=bglA PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 3
Query:  207 VDSISDRLDFIGINYYGQEVVS---GPGLKLVETDEYS------ESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSDETDLI---------RRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRATIL 605
            ++ I   +DFIGINYY   +     G    ++ ++  S      + G  +Y +GL+ +L    ++Y +  L   ITENG      L          R  Y+  HL+    A+  G+ + GY+ W++ DN+EWA+GYG +FGLV VD  T++
Sbjct:  281 MELIHQPIDFIGINYYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRYTADKYGNPTL--YITENGACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNFEWAEGYGMRFGLVHVDYDTLV 429          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGLA_CLOTH (Beta-glucosidase A OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 3
Query:  216 ISDRLDFIGINYYGQEVVS---------GPGLKLVETDEYSESGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVS--DET-------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRATI 602
            IS  +DFI  N Y  E +           P   ++E  E ++ G  +YP+GL+ +L      Y   N+  +I+ENG +  DE        D  R  Y+ ++L   + A+  GV +  Y  W++ DN+EWA GY  +FG+V V+  T+
Sbjct:  284 ISQPIDFIAFNNYSSEFIKYDPSSESGFSPANSILEKFEKTDMGWIIYPEGLYDLLMLLDRDYGKPNI--VISENGAAFKDEIGSNGKIEDTKRIQYLKDYLTQAHRAIQDGVNLKAYYLWSLLDNFEWAYGYNKRFGIVHVNFDTL 428          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 47/159 (29.56%), Postives = 66/159 (41.51%), Query Frame = 3
Query:  210 DSISDRLDFIGINYYGQEVVSGPGLKLVETDEYSESGRG---------------------VYPDGLFRVLHQFHERYKHLNLPFIITENGVSDET-----------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVD 590
            + +    DFIG+NYY               + Y+                          +YP+GL  +L    E Y   N    ITENGV +             D IR  Y  +HLLA+ +AM  G  V GY  W++ DN+EW++GY  +FG+  VD
Sbjct:  355 EMVKGAFDFIGLNYYASSYADNDPPSYGHNNSYNTDSHAKITGSRNGIPIGPQAASFWFYIYPEGLRELLLHIKENYG--NPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVD 511          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 54/160 (33.75%), Postives = 74/160 (46.25%), Query Frame = 3
Query:  225 RLDFIGINYY-----------------GQEVVSGPGLKL-----VETDEYSE-SGRGVYPDGLFRVLHQFHERYKHLNLPFIITENGVSD----ET-------DLIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVDRATI 602
            R DF+GIN+Y                 G     G  LKL     V   E ++ + + + P G  ++L+   +RY   N+P  ITENG  D    ET       D  R  Y+  +L A+ AAM  G  V GY  W++ DN+EW  GY  +FGL  VD  T+
Sbjct:  335 RADFVGINHYTSYFIQDCLTSACNTGHGAFKAEGYALKLDRKGNVTIGELTDVNWQHIDPTGFHKMLNYLKDRYP--NMPMFITENGFGDLQKPETTDKELLNDTKRIQYMSGYLEALQAAMRDGANVKGYFVWSLLDNFEWLFGYKVRFGLFHVDLTTL 492          
BLAST of DR908610 vs. ExPASy Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 3
Query:  231 DFIGINYYGQEVVSGPGLKLVETDEYS----------ESGRGV-----------YPDGLFRVLHQFHERYKHLNLPFIITENGVSDETD-----------LIRRPYVIEHLLAVYAAMITGVPVIGYLFWTISDNWEWADGYGPKFGLVAVD 590
            DF+G+N+Y   ++S    K  E++ Y           E+G  +            P G+ + L+   ++Y H   P  ITENG+ DE D             R  Y   +L  V  A+  GV + GY  W++ DN+EWA GY  +FGLV VD
Sbjct:  310 DFLGLNHYTSRLISHVSNKEAESNFYQAQELERIVELENGDLIGERAASDWLYAVPWGIRKTLNYMSKKYNHP--PIFITENGMDDEDDGSASIHDMLDDKRRVDYFKSYLANVSQAIEDGVDIKGYFAWSLLDNFEWAQGYTKRFGLVYVD 459          
The following BLAST results are available for this feature:
BLAST of DR908610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
BGLS_CALSA4.046e-1334.25Beta-glucosidase A OS=Caldocellum saccharolyticum ... [more]
BGLB_PAEPO6.901e-1329.71Beta-glucosidase B OS=Paenibacillus polymyxa GN=bg... [more]
BGLS_AGRSA2.008e-1236.05Beta-glucosidase OS=Agrobacterium sp. (strain ATCC... [more]
BGLA_BACCI2.008e-1231.79Beta-glucosidase OS=Bacillus circulans GN=bglA PE=... [more]
BGLA_CLOTH9.965e-1231.29Beta-glucosidase A OS=Clostridium thermocellum (st... [more]
BGL10_ORYSJ9.965e-1229.56Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]
BGL45_ARATH2.899e-1133.75Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGL... [more]
BGL42_ARATH2.899e-1131.58Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16738 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-16_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908610 ID=DR908610; Name=DR908610; organism=Citrus sinensis; type=EST; length=608bp
CTGCCTTACCTACTGGTGTTTTCAATCAAGCCATGCATTGGATGGCCATT
GCACACTCAAAGGCCTATGATTATATTCATGCAAAAAGCAGCACATCAAC
AAAGTCGAAGGTTGGGGTAGCACACCATGTATCATTTATGCGACCATATG
GTCTCTTTGATGTTGCTGCGGTTACATTGGCTAATACCCTTACCACCTTT
CCATATGTGGATAGTATCTCTGACAGGCTGGATTTTATAGGCATTAACTA
CTACGGACAGGAAGTGGTCTCTGGTCCTGGCTTGAAGCTAGTAGAGACTG
ATGAGTACAGTGAATCTGGACGTGGCGTATATCCTGATGGTCTGTTCCGT
GTGCTGCACCAGTTCCATGAAAGATACAAGCATTTGAACTTACCCTTCAT
CATAACAGAAAATGGGGTTTCTGATGAGACAGATCTGATTCGTCGACCAT
ATGTTATAGAACATTTGCTTGCTGTTTATGCTGCCATGATTACAGGTGTC
CCTGTGATTGGTTATCTTTTTTGGACTATTTCTGACAATTGGGAATGGGC
TGATGGGTATGGTCCCAAGTTTGGACTCGTTGCAGTGGACCGGGCAACAA
TCTTGCCC
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