DR908607

Overview
NameDR908607
Unique NameDR908607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS22_CANAL (40S ribosomal protein S22 OS=Candida albicans GN=RPS22A PE=3 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 1.815e-53
Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLNKCGVI PRF+V + +IE WT  LLP+RQFGY++LTTSAGIMDHEEARRK+V GK+LGF Y
Sbjct:    5 SVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLTVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVIQPRFNVKINDIERWTDNLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS22_NEUCR (40S ribosomal protein S22 OS=Neurospora crassa GN=rps-22 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.095e-53
Identity = 98/126 (77.78%), Postives = 115/126 (91.27%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            SVL+DAL S+ NAEK GKRQV+IRPSSKVIIKFL VMQKHGYIGEFE VDDHR+GKIVV+LNGR+NKCGVISPR++V + E+E W  +LLP+RQFGY++LTTSAGIMDHEEARRK+V GK++GFFY
Sbjct:    5 SVLHDALNSINNAEKAGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEEVDDHRSGKIVVQLNGRMNKCGVISPRYNVRLAELEKWVVKLLPARQFGYVILTTSAGIMDHEEARRKHVSGKIIGFFY 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS22_ASHGO (40S ribosomal protein S22 OS=Ashbya gossypii GN=RPS22A PE=3 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 4.043e-53
Identity = 98/126 (77.78%), Postives = 113/126 (89.68%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+L GRLNKCGVISPRF+V + ++E WTA LLP+RQFGY++LTTSAGIMDHEEA RK+V GK+LGF Y
Sbjct:    5 SVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLTGRLNKCGVISPRFNVKINDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVAGKILGFVY 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_STRPU (40S ribosomal protein S15a OS=Strongylocentrotus purpuratus GN=RPS15A PE=2 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 5.280e-53
Identity = 98/126 (77.78%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DAL+S+ NAEKR KRQV+IRP SKV +KFL+VM KHGYIGEFE VDDHR GKI+V LNGRLNKCGVISPRFDV + E+E WT+ LLPSRQFGY+VLTTS GIMDHEEARRK+VGGK+LGFF+
Sbjct:    5 NVLADALRSICNAEKRCKRQVLIRPCSKVTVKFLMVMMKHGYIGEFEIVDDHRGGKIIVNLNGRLNKCGVISPRFDVPINEMEKWTSNLLPSRQFGYVVLTTSGGIMDHEEARRKHVGGKILGFFF 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_RAT (40S ribosomal protein S15a OS=Rattus norvegicus GN=Rps15a PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 99/126 (78.57%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W   LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK+LGFF+
Sbjct:    5 NVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_MOUSE (40S ribosomal protein S15a OS=Mus musculus GN=Rps15a PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 99/126 (78.57%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W   LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK+LGFF+
Sbjct:    5 NVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_HUMAN (40S ribosomal protein S15a OS=Homo sapiens GN=RPS15A PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 99/126 (78.57%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W   LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK+LGFF+
Sbjct:    5 NVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_DROYA (40S ribosomal protein S15a OS=Drosophila yakuba GN=RpS15Aa PE=2 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 99/126 (78.57%), Postives = 111/126 (88.10%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DALK + NAEKRGKRQV++RP SKVIIKFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT  LLPSRQFGY+VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct:    5 NVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVDDHRSGKIVVNLTGRLNKCGVISPRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFFF 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_DROME (40S ribosomal protein S15Aa OS=Drosophila melanogaster GN=RpS15Aa PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 99/126 (78.57%), Postives = 111/126 (88.10%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DALK + NAEKRGKRQV++RP SKVIIKFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT  LLPSRQFGY+VLTTS GIMDHEEARRK++GGK+LGFF+
Sbjct:    5 NVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVDDHRSGKIVVNLTGRLNKCGVISPRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFFF 130
[Close]
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS15A_BOVIN (40S ribosomal protein S15a OS=Bos taurus GN=RPS15A PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.007e-53
Identity = 99/126 (78.57%), Postives = 112/126 (88.89%), Query Frame = 1 
Query:    1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378
            +VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W   LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK+LGFF+
Sbjct:    5 NVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
The following BLAST results are available for this feature:
BLAST of DR908607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
RS22_CANAL1.815e-5378.5740S ribosomal protein S22 OS=Candida albicans GN=R... [more]
RS22_NEUCR3.095e-5377.7840S ribosomal protein S22 OS=Neurospora crassa GN=... [more]
RS22_ASHGO4.043e-5377.7840S ribosomal protein S22 OS=Ashbya gossypii GN=RP... [more]
RS15A_STRPU5.280e-5377.7840S ribosomal protein S15a OS=Strongylocentrotus p... [more]
RS15A_RAT9.007e-5378.5740S ribosomal protein S15a OS=Rattus norvegicus GN... [more]
RS15A_MOUSE9.007e-5378.5740S ribosomal protein S15a OS=Mus musculus GN=Rps1... [more]
RS15A_HUMAN9.007e-5378.5740S ribosomal protein S15a OS=Homo sapiens GN=RPS1... [more]
RS15A_DROYA9.007e-5378.5740S ribosomal protein S15a OS=Drosophila yakuba GN... [more]
RS15A_DROME9.007e-5378.5740S ribosomal protein S15Aa OS=Drosophila melanoga... [more]
RS15A_BOVIN9.007e-5378.5740S ribosomal protein S15a OS=Bos taurus GN=RPS15A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16735 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-41_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908607 ID=DR908607; Name=DR908607; organism=Citrus sinensis; type=EST; length=609bp
AGTGTTCTGAATGATGCTCTTAAGAGCATGTATAATGCCGAGAAAAGGGG
GAAGCGTCAGGTTATGATCAGACCATCCTCCAAGGTTATCATTAAGTTTC
TTCTGGTGATGCAAAAGCACGGGTACATTGGTGAGTTTGAGTATGTTGAT
GACCACAGAGCTGGTAAGATTGTGGTTGAACTGAATGGAAGATTGAACAA
ATGTGGGGTTATCAGTCCCCGTTTTGATGTTGGCGTCAAGGAGATTGAAG
GTTGGACTGCTAGGTTGCTTCCCTCAAGACAGTTTGGATACATTGTGCTG
ACAACTTCTGCTGGCATTATGGACCACGAAGAGGCGAGAAGGAAGAATGT
TGGTGGTAAAGTGCTTGGTTTTTTCTACTAGGCAAAGTTCATATTGAGAA
TGGGACTTGAGTTTTTTTTGTGTACTTTGGAAGAACTTGTTCACAAATGG
ATTAGCTTCTCTTTGTTTTACTTGATTTAATTATGCATTTTTAAACTCGG
ATTGGTACTTTTTAGTTGAAGAAAGATGATATTATGTGTTACACACATTT
ATCTCTTAGCAGTTGATTTGGTGATCAATTTTCCCAAGTTCTGTTAACAT
CTGATTGTG
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