DR908607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31 Identity = 64/129 (49.61%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 + L++AL S+YN E R +Q +I PSSK+I+ L VMQK GY+GEFEY+DD R GKI+V+L GR+NKCG I+PR+ + +E + + R LPS++ G I+++T G+M H+EA R+ GG VLG+ Y Sbjct: 5 NTLSNALSSLYNNEMRRNKQAIIMPSSKLIVNVLRVMQKEGYVGEFEYIDDGRWGKILVQLMGRINKCGAITPRYSLTYREMISLPDYIRRYLPSKEIGVIIVSTPKGVMTHKEAARQRTGGIVLGYVY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRFU (30S ribosomal protein S8P OS=Pyrococcus furiosus GN=rps8p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.330e-31 Identity = 63/124 (50.81%), Postives = 90/124 (72.58%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N+E+ GKR+V I+P+SK+I + L VMQK+GYIGEFE++DD RAG V+L GR+NK G I PRF V V E E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 7 LANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRAB (30S ribosomal protein S8P OS=Pyrococcus abyssi GN=rps8p PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.350e-31 Identity = 61/124 (49.19%), Postives = 91/124 (73.39%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N+E+ GKR+V I+P+SK+I + L VMQK+GYIGEFE++DD RAG V+L G++NK G I PRF V ++ E W R LP+ +FG ++++TS G+M H+EAR K +GG+++ + Y Sbjct: 7 LANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGKINKAGAIKPRFPVKARDYERWEKRFLPAFEFGILIVSTSQGVMSHKEAREKGIGGRLIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRHO (30S ribosomal protein S8P OS=Pyrococcus horikoshii GN=rps8p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.690e-31 Identity = 61/124 (49.19%), Postives = 90/124 (72.58%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N+E+ GKR++ I+P+SK+I + L VMQK+GYIGEFE++DD RAG V+L GR+NK G I PRF V E E W R LP+ +FG ++++TS G+M H+EAR + +GG+++ + Y Sbjct: 7 LANALSHITNSERVGKREIYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKATEYEKWEKRFLPAFEFGILIVSTSQGVMSHKEARDRGIGGRLIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_UNCMA (30S ribosomal protein S8P OS=Uncultured methanogenic archaeon RC-I GN=rps8p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.159e-30 Identity = 61/124 (49.19%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + NAE GK +I P+SK+I L VMQ GY+GEFE+VD+ +AG++ V+L G++NKCGV+ PRF VG E+E W R LP+R FG ++LTTS G+M H +A + +GG++L + Y Sbjct: 7 LANALSVIKNAETTGKTDCVIDPASKIIGNVLKVMQDQGYVGEFEFVDNGKAGQLKVKLIGKINKCGVVKPRFAVGKTEMEKWEKRYLPARNFGTLILTTSKGVMSHYDAAKMGIGGEILAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.819e-30 Identity = 62/127 (48.82%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDV---GVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL ++YN E R +Q +I P+SK+II L VMQK GYIGEFEY+DD RAGKI+V+L GR+NKCG ISPR+ + G+ + + + LPS++ G I+++T G+M H + R+ +GG LG+ Y Sbjct: 7 LANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_SULSO (30S ribosomal protein S8P OS=Sulfolobus solfataricus GN=rps8p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 62/127 (48.82%), Postives = 89/127 (70.08%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG LG+ Y Sbjct: 7 LANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYVRRYLPSKEIGIIIVSTSKGVMSHKEAARLRIGGVALGYVY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 60/124 (48.39%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L DA+ ++ NAE GK + +I+P+SK+I L VM GYIGEFE++DD ++G V+L GR+N+CGVI PRF + V E+E W R LP+R FG ++L+TS G+M H +AR + +GG +L + Y Sbjct: 6 LADAMSTIKNAENVGKPECIIKPASKLIAMTLKVMADLGYIGEFEFIDDGKSGMFKVKLLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGGHLLAYVY 129
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METBU (30S ribosomal protein S8P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps8p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 64/124 (51.61%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L DAL + NAE GK IRP+SK+I L VM GYIG+FE+V+D +AG VEL GR+NKCG I PR+ VGV E E W + LP++ FG ++LTT G++ EAR NVGG++L F Y Sbjct: 7 LADALSIIKNAEAVGKDSCTIRPASKLIGNVLKVMNDRGYIGDFEFVEDGKAGVYTVELIGRINKCGAIKPRYSVGVTEFERWEKQFLPAKNFGVLILTTPKGVISQYEARENNVGGQLLSFVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_THESM (30S ribosomal protein S8P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps8p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.281e-30 Identity = 62/124 (50.00%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N+EK GK +V I+P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++NK G I PRF V KE E W R LP+ +FG +V++TS G+M H+EA K +GG+++ + Y Sbjct: 7 LANALSHITNSEKVGKSEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLLGKVNKAGAIKPRFSVKAKEYEKWEKRFLPAFEFGILVVSTSQGVMTHKEALEKGIGGRLIAYVY 130 The following BLAST results are available for this feature:
BLAST of DR908607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908607 ID=DR908607; Name=DR908607; organism=Citrus sinensis; type=EST; length=609bpback to top |