DR908607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_KORCO (30S ribosomal protein S8P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps8p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L DA+ ++ N GKR+V+I +SK+I K L V+++HGYI EFEYVDD R GK VV LNGR+NK GVI PRF V V E W LP+ G I+++T+ G+M H EA+ + +GG ++ + Y Sbjct: 7 LADAMSTLTNGSMLGKREVVINIASKLIGKVLKVLKEHGYIDEFEYVDDGRFGKYVVRLNGRINKAGVIKPRFPVKVGEFSRWEKIYLPAENVGLIIVSTNQGVMTHREAKERGIGGVLIAYCY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METMA (30S ribosomal protein S8P OS=Methanosarcina mazei GN=rps8p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL ++ NAE GK ++RP+SK I L VMQ GYIG+FE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG ++LTTS+G+M EAR K +GG++L + Y Sbjct: 7 LANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28 Identity = 59/124 (47.58%), Postives = 88/124 (70.97%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N E+ GK+ V I+P+SK+I + L VMQ +GYIGEFE+++D RAG VEL G++NKCG I PRF V E + R LP+R FG ++++T+ G+M HEEA+++ +GG++L + Y Sbjct: 7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METAC (30S ribosomal protein S8P OS=Methanosarcina acetivorans GN=rps8p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.501e-28 Identity = 59/124 (47.58%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL ++ NAE GK ++RP+SK I L VMQ GYIG+FE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++L + Y Sbjct: 7 LANALSTIKNAEAIGKSSCVVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTASFERWEKQFLPAKNFGALIVTTSSGVMSQYEARDKKIGGQLLAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.879e-28 Identity = 58/125 (46.40%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 4 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 +L++AL + NAE GK+QV+I P +K+I L V+Q++GY+GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G+M H EA+ + +GG +L + Y Sbjct: 6 LLSNALIQIKNAEIMGKKQVVIWPVNKLIYHTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.678e-28 Identity = 57/124 (45.97%), Postives = 88/124 (70.97%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N+E+ GK++V I+P+SK+I + L VM ++GYIGEFE +DD RAG V+L G++NK G I PRF V ++ E W R LP+ +FG ++++TS G+M H+EA K +GG+++ + Y Sbjct: 7 LANALSHITNSERVGKKEVYIKPASKLIGEVLRVMLENGYIGEFELIDDGRAGIYRVQLIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METB6 (30S ribosomal protein S8P OS=Methanoregula boonei (strain 6A8) GN=rps8p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.678e-28 Identity = 54/126 (42.86%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 + + D + ++ NA GK +V I P+SK++ L +MQ GYI FE+++D R G++ V L G++NKCG I PRF V + E+E W + LP + FG ++L+TS G+M H +ARR+ +GG++LG+ Y Sbjct: 5 NTIADGMSALKNAGDTGKSEVTIEPASKLLGAMLRIMQDAGYIAGFEFIEDGRGGQLKVHLTGKINKCGAICPRFSVQLDEMEYWEKQYLPGKNFGLMILSTSHGVMSHVQARREGIGGELLGYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRAR (30S ribosomal protein S8P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27 Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 4 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 +L++AL + NAE GKRQV I P +K+ L V+Q++GY+GE EYVDD R GK +V+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G++ H EA+ K +GG +L + Y Sbjct: 6 ILSNALIQIKNAEVMGKRQVTIWPVNKLTYYTLRVLQRYGYVGEIEYVDDGRGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVVSHIEAKEKKIGGVLLAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_STAMF (30S ribosomal protein S8P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.710e-27 Identity = 61/127 (48.03%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIE---GWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL ++ NAE R K + +I P+SK+II L VMQ+ GYIGEFEY+DD R GKI V+L GR+NK GVI PRF V ++++E W + LP+ G ++L+T G++ H+EA K GG +L + Y Sbjct: 7 LANALATIQNAEMRAKSEALIWPASKLIINVLRVMQREGYIGEFEYIDDGRWGKIKVQLLGRINKTGVIKPRFPVKLRDLERMPHWLRKYLPAYNIGILILSTPHGVLSHKEAIAKKTGGVLLAYVY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.918e-27 Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L DAL ++ N E + K +I P+SK+I + L MQK YIG FEY+DD+RAG+ VEL G +NKCGVI PR V E E + R LP++ FG +++TT GIM H EA+ + +GG++L + Y Sbjct: 7 LADALTNIRNNELQVKDSCVISPASKLIGEVLSTMQKENYIGNFEYIDDNRAGQFKVELEGNINKCGVIKPRHAVKKDEFEKFEKRYLPAKNFGILIVTTPEGIMTHYEAKERGIGGRLLAYMY 130 The following BLAST results are available for this feature:
BLAST of DR908607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908607 ID=DR908607; Name=DR908607; organism=Citrus sinensis; type=EST; length=609bpback to top |