DR908607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27 Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 LND + S+ NA + GKR+++ P++K+I K L VMQ + YI FE +D+ R GK + LN +N CGVI PRF V + +E + AR LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 6 LNDVINSIKNASRLGKREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_IGNH4 (30S ribosomal protein S8P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps8p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27 Identity = 59/127 (46.46%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL ++YN E RG ++ +I P+SK+I L +MQK GY+GEFEY+DD R GKI V L GR+NKCG I PR V ++ + R LPS+ G ++++TS G+M H+EA +K VGG + + Y Sbjct: 7 LANALTTIYNNEVRGNKEAIIMPASKLIANVLRIMQKEGYVGEFEYIDDGRWGKIRVRLLGRINKCGAIKPRVSVSYRDLLVLPEHLRRFLPSKDVGILIISTSQGLMTHKEAIQKRVGGIAIAYVY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_HALLT (30S ribosomal protein S8P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps8p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26 Identity = 54/122 (44.26%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 13 DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 +AL M NAE G + P+S +I L V+ GY+ FEYVDD +AGK VEL G +N+CG + PR+ G E E W R LP+R +G +++TTS G+M H EAR + +GG+V+ + Y Sbjct: 9 NALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_DESK1 (30S ribosomal protein S8P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps8p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26 Identity = 58/127 (45.67%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL ++YNAE R K++V++ P+SK+ + L V+Q+ GYIGEFEY+DD R GKI ++L GR+NK GVI PR+ V +E+ W R LP+ G I+++T G++ H+EA K GG +L + Y Sbjct: 7 LANALSAIYNAEIRAKKEVVVWPASKLTLNVLKVLQREGYIGEFEYIDDGRWGKIKIQLLGRINKIGVIKPRYPVKHRELAEFPEWLKRYLPAYNIGVIIVSTPYGVLSHKEAVEKQTGGVLLAYCY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_THEVO (30S ribosomal protein S8P OS=Thermoplasma volcanium GN=rps8p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.891e-26 Identity = 54/124 (43.55%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 LND + S+ NA + G+R+++ P++K+I K L VMQ + YI FE +D+ R GK + LN +N CGVI PRF V + +E + +R LP+ FG ++LTT+ G+M + EAR+ +GGK+L + Y Sbjct: 6 LNDVINSIKNASRLGRREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYESRYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.470e-26 Identity = 54/124 (43.55%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L++A+ ++ NAE G+++ I+P+SK+I L VM+ +GYI FEYV++HR GK +VEL+G +N CG I PRF V E E + R LP+R FG ++++T+ G+M ++AR++ +GG +L + Y Sbjct: 6 LSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PYRAE (30S ribosomal protein S8P OS=Pyrobaculum aerophilum GN=rps8p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.226e-26 Identity = 53/125 (42.40%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 4 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 +L++AL + NAE GK+Q +I P +K+ L V+Q++GY+GE EY+DD + GK +V+L G++N G I PR+ V +EI W + LP+RQ G ++++TS G+M H EA+ + +GG +L + Y Sbjct: 6 ILSNALIQIKNAEIVGKKQAVIWPVNKLTYYTLRVLQRYGYVGEIEYIDDGKGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILIISTSQGVMSHIEAKERKIGGVLLAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_PICTO (30S ribosomal protein S8P OS=Picrophilus torridus GN=rps8p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.226e-26 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 LND + ++ NA + GK +V+I P+S +I + L VMQ + YI FE +++ R GK VEL+ +N CGVI PR V IE + +R LP++ FG I+LTT+ GIM H EAR+ +GGK+L + Y Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_NITMS (30S ribosomal protein S8P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps8p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.385e-26 Identity = 53/126 (42.06%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 ++L + ++YN E R K + I P+SK+ I+ L +QK GYIGEFE++DD R GK ++L ++ KCG ISPRF V E W + LP+ G +++TT+ G+M H EA +K +GG ++G+ Y Sbjct: 5 NILANLFVTLYNNETRRKGECTILPTSKLGIEVLKTLQKDGYIGEFEHIDDKRGGKFKIKLLAKITKCGAISPRFKVKTDEFNNWEQQYLPAYDRGMLLVTTNQGVMSHHEATQKGIGGFLIGYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METTL (30S ribosomal protein S8P OS=Methanococcus thermolithotrophicus GN=rps8p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.226e-25 Identity = 53/124 (42.74%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N E GK ++P+SK+I + L VMQ HGYIG FEY++D RAG VEL G++NKCG + PR+ V +E E + R LP++ FG ++++T G+M H+EA+ + +GG+++ + + Sbjct: 7 LANALNHISNCEGVGKSVAYVKPASKLIGRVLNVMQDHGYIGNFEYIEDGRAGIYKVELIGQINKCGAVKPRYAVKKQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKNQGLGGRLISYVF 130 The following BLAST results are available for this feature:
BLAST of DR908607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908607 ID=DR908607; Name=DR908607; organism=Citrus sinensis; type=EST; length=609bpback to top |