DR908607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_METHJ (30S ribosomal protein S8P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps8p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24 Identity = 48/122 (39.34%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 13 DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 DA+ ++ NA G+ + +++P+ ++I + L +M++ GYI E+ ++D R G+ V ++G +NKCG ISPR+ V + E+E W LPS+ G ++++TS G+M H +ARR VGG++LG+ Y Sbjct: 9 DAMSTLKNASDTGRAECIVQPAGRLIGELLRIMKEAGYIKEYTRIEDGRGGQFKVVMSGLINKCGCISPRYSVSLDEMEYWEQLYLPSKNIGMLMISTSKGVMGHHDARRNGVGGELLGYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_HALSA (30S ribosomal protein S8P OS=Halobacterium salinarium GN=rps8p PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L+DAL + NAE G + P+S ++ L V GYI FE+VD+ +AG+ VEL G +N+CG ++PR+ VG E W R LP+R +G +V+TTS GIM H EAR +GG+V+ + Y Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_HALS3 (30S ribosomal protein S8P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps8p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L+DAL + NAE G + P+S ++ L V GYI FE+VD+ +AG+ VEL G +N+CG ++PR+ VG E W R LP+R +G +V+TTS GIM H EAR +GG+V+ + Y Sbjct: 7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_HALMA (30S ribosomal protein S8P OS=Haloarcula marismortui GN=rps8p PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 13 DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 +AL ++ NAE G + + P+S I L V GYI F +VDD +AG+ VEL G +N+CG + PR+ G E E W R LP+R +G +V+TTS GIM H EAR + VGG+V+ + Y Sbjct: 9 NALSALNNAESVGHLEQTVSPASNEIGSVLEVFYDRGYIDGFSFVDDGKAGEFEVELKGAINECGPVKPRYSAGADEFEKWEKRFLPARDYGTLVVTTSHGIMSHYEAREQGVGGQVIAYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_META3 (30S ribosomal protein S8P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps8p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24 Identity = 50/124 (40.32%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +AL + N E+ GK ++P+SK+I + VMQ GY+G FEY++D +AG VEL G +NKCG + PR+ V E E + R LP++ FG ++++T G+M H+EA+ +GG+++ + Y Sbjct: 7 LANALNHLSNCERVGKDVAYVQPASKLIGRVFKVMQDKGYMGNFEYIEDGKAGIYKVELTGHINKCGAVRPRYAVKKTEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKSNGLGGRLISYIY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_CENSY (30S ribosomal protein S8P OS=Cenarchaeum symbiosum GN=rps8p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.957e-23 Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 1 SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 ++L + ++YN E R + + P+SK+ ++ L ++K GYIGEFE+V+D R GK V L ++ KCG ISPRF V E W + LPS G +V+TT+ G+M H EA + +GG ++G+ Y Sbjct: 5 NILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_AERPE (30S ribosomal protein S8P OS=Aeropyrum pernix GN=rps8p PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.556e-23 Identity = 55/127 (43.31%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 7 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARL---LPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 L +A+ ++ NAE RGK + +I PSSK+I L +++K GYIG FEY+DD R GK V+L GR+N GV+ PR V +E+ L L SR G ++L+T G+M H EA ++ +GG V+ + Y Sbjct: 7 LANAMAAIKNAEMRGKGEAIIMPSSKLIANVLRILEKEGYIGGFEYIDDGRWGKFRVKLLGRINDIGVVKPRTPVSYRELAKMPEHLRKYLASRDVGLLILSTPQGVMTHREALKRKIGGIVIAYVY 133
BLAST of DR908607 vs. ExPASy Swiss-Prot
Match: RS8_NANEQ (30S ribosomal protein S8P OS=Nanoarchaeum equitans GN=rps8p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.575e-17 Identity = 41/125 (32.80%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 4 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 378 ++ D L + N ++G+ + P S +IIK + +M++ GYI + VD R I +EL+ N+ I PRF V E+E + R LP+ FG ++L+TS G++ + EA+ + +GG ++ + Y Sbjct: 5 IVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129 The following BLAST results are available for this feature:
BLAST of DR908607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908607 ID=DR908607; Name=DR908607; organism=Citrus sinensis; type=EST; length=609bpback to top |