DR908604

Overview
NameDR908604
Unique NameDR908604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 3.517e-73
Identity = 125/155 (80.65%), Postives = 145/155 (93.55%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVD+NP+++ +AKKFG TEFVNPKD+DKPVQ+V+ E+TNGGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVP+KDD FKTHPMN L+E+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RCI+RM+
Sbjct:  224 GVDINPAKYEQAKKFGCTEFVNPKDHDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRME 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.337e-72
Identity = 125/155 (80.65%), Postives = 142/155 (91.61%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDLN +RF EAKKFG+TEFVNPKD+ KPVQ+VIAE+TNGGVDRS+ECTG++QAMI AFECVHDGWGVAVLVGVP+KD  F THPMN LNERTLKGTFFGNYKPR+D+PSVVEKYMNKE+E++KFITH +PFS+INKAFD ML GE IRCII M+
Sbjct:  225 GVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITME 379          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.337e-72
Identity = 127/155 (81.94%), Postives = 141/155 (90.97%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            G+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  224 GIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.337e-72
Identity = 127/155 (81.94%), Postives = 141/155 (90.97%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            G+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  224 GIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 5.079e-72
Identity = 122/155 (78.71%), Postives = 141/155 (90.97%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ EMTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  224 GVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.079e-72
Identity = 122/155 (78.71%), Postives = 141/155 (90.97%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ EMTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KE+ELEKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  224 GVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.131e-71
Identity = 127/155 (81.94%), Postives = 139/155 (89.68%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDLN  RF EA+KFG TEFVNPKD+ KPVQQV+A+MTNGGVDRSVECTG+V AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KE+E+EKFITH+VPFSEIN AFDLM  GE IRCIIRMD
Sbjct:  224 GVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCIIRMD 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.930e-71
Identity = 126/155 (81.29%), Postives = 141/155 (90.97%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDL+  RF EAKKFGVTEFVNPK ++KPVQ+VIAE+TN GVDRS+ECTGS +AMISAFECVHDGWGVAVLVGVP+KD  FKTHP+N LNERTLKGTFFGNYK R+D+PSVVEKYMNKE+ELEKFITH VPFSEINKAF+ ML GE +RCIIRM+
Sbjct:  225 GVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRME 379          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 8.965e-69
Identity = 117/155 (75.48%), Postives = 137/155 (88.39%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDLNP+++ +AKKFG T+FVNPKD+ KPVQ+V+ EMTNGGVDR+VECTG + AMI+ FECVHDGWGVAVLVGVP+K+  FKTHPMN LNE+TLKGTFFGNYKPR+DLP VVE YM KE++LEKFITH+VPFS+IN AFDLML GE +RCI R D
Sbjct:  224 GVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCITRTD 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 4.449e-68
Identity = 119/142 (83.80%), Postives = 133/142 (93.66%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLM 426
            GVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+AEMTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KE+E+EKFITH+VPF+EINKAFDLM
Sbjct:  151 GVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLM 292          
The following BLAST results are available for this feature:
BLAST of DR908604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH2_MAIZE3.517e-7380.65Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH_FRAAN1.337e-7280.65Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_ORYSJ1.337e-7281.94Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.337e-7281.94Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH2_ORYSJ5.079e-7278.71Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI5.079e-7278.71Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_HORVU1.131e-7181.94Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH_MALDO1.930e-7181.29Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH3_HORVU8.965e-6975.48Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_ZEALU4.449e-6883.80Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16732 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908604 ID=DR908604; Name=DR908604; organism=Citrus sinensis; type=EST; length=609bp
GGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGT
TACCGAGTTTGTGAATCCAAAAGATTATGACAAACCTGTTCAACAGGTGA
TTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGA
AGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGATGGTTGGGG
TGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTC
ATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGC
AACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAAATACATGAA
CAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGCCCTTCTCGG
AGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGCATTAGGTGC
ATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAAT
GGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATATATTACCCC
GAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTT
TCAAAGAGT
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