DR908604

Overview
NameDR908604
Unique NameDR908604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.317e-29
Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            G+D+N  +F +A   G TE +NP+D+ KP+ +V+++MT   V  + E  G ++ M+ A    H  +G +V+VG P         PM L   RT KG  FG +K R D+P +V +++ K+ +L + ITH +PF  I++ F+L+ SG+SIR ++
Sbjct:  221 GIDINKDKFQKALDVGATECINPRDFTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLSYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLGQLITHTLPFHNISEGFELLYSGQSIRTVL 372          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.020e-28
Identity = 56/157 (35.67%), Postives = 97/157 (61.78%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKD---YDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            +D+N  +     +FG T+FVNPK+    D+ + + + EMT+GG+D + +CTG+ + M  A E  H GWG ++++GV    +   T P  L+  R  KG+ FG  K RS++  +++ Y    +++E+FITH  PF EIN+AF+ + +G+ +R +++ D
Sbjct:  227 IDINNKKKQYCSQFGATDFVNPKEDLAKDQTIVEKLIEMTDGGLDFTFDCTGNTKIMRDALEACHKGWGQSIIIGVAAAGEEISTRPFQLVTGRVWKGSAFGGIKGRSEMGGLIKDYQKGALKVEEFITHRRPFKEINQAFEDLHNGDCLRTVLKSD 383          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28
Identity = 59/152 (38.82%), Postives = 99/152 (65.13%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            GV  +  +F +A + G TE +NPKDYDKP+ +VI E TNGGVD +VEC G ++ M++A +  + G GV V++G+ + ++     P+ LL  R+LKG+ FG +K   ++  +V+ YM K++ +   ++  +   +INKAF+L+ SG+ +R I+
Sbjct:  221 GVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIM 371          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28
Identity = 59/153 (38.56%), Postives = 92/153 (60.13%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            GVD+N  +F +AK+ G TE VNP DY KP+ +V+ ++T G GVD S E  G    M +A    H  +G +++VG+P         P  +   RT KG+ FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F+L+ +G+SIR ++
Sbjct:  221 GVDINKDKFPKAKEMGATECVNPLDYKKPINEVLFDLTGGEGVDYSFEVIGRTDTMTAALASCHMDYGTSIIVGLPPSASEITFSPGLIFTGRTWKGSVFGGWKSKDSVPRLVSDFMQKKFSLDPLITHTMPFDKINEGFELLRAGKSIRSVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQV--IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD++  +    +K G T FVNP    +    V  + EMT+GG D + +CTG+V  M +A E  H GWG +V++GV        T P  L+  RT KG  FG  K RS LP +V  Y++ ++++E+FITH  P + INKAF+ M +G+ IR ++
Sbjct:  226 VDISDKKEEWGQKLGATAFVNPTKLPEGTTIVDKLIEMTDGGCDFTFDCTGNVGVMRNALEACHKGWGTSVIIGVAAAGKEISTRPFQLVTGRTWKGAAFGGVKGRSQLPGIVNNYLDGKLKVEEFITHREPLAAINKAFEEMHAGDCIRAVV 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27
Identity = 56/152 (36.84%), Postives = 94/152 (61.84%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            GVD+N  +F +A++ G TE +NP+D  KP+Q+V+ +MT+ G+D   E  G++  + +A    ++ +GV V+VG+       K       + R+LKG+ FG +K R  +P +V  YM K++ L+  ITH +   +IN+A +LM +G+ IRCI+
Sbjct:  222 GVDVNKEKFKKARELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGLLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAKKLNLDPLITHTLNLDKINEAVELMKTGKCIRCIL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.186e-26
Identity = 58/155 (37.42%), Postives = 92/155 (59.35%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQV--IAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 462
            +D+N S+   A +FG T+FVNP    +    V  + ++T+GG D + +CTG+VQ M +A E  H GWG ++++GV        T P  L+  R  +G  FG  K R+ +PS+V+ Y++ ++++++FITH      INKAF  M +G  IR +I M
Sbjct:  224 IDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDGGFDYTFDCTGNVQVMRNALESCHKGWGESIIIGVAAAGKEISTRPFQLVTGRVWRGCAFGGIKGRTQMPSLVQDYLDGKIKVDEFITHRHDLDNINKAFHDMHAGNCIRAVITM 378          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.091e-25
Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVG-VPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  RF +AK  G T+ V+P+D++KP+++V+++M +GGVD   E TG+ +A+ +A    H   GV V VG + +             + R LKG+  G +K + ++P +V  YM K+  ++  ITH +  SE N+A  LM SG+ IRC++
Sbjct:  223 VDINKDRFAKAKTVGATDCVDPRDFEKPIEEVLSDMIDGGVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVGALASFTSTLSIRSHLFFSGRILKGSILGGWKTKEEIPKLVSDYMAKKFNIDPLITHTLTLSEANEAVQLMKSGQCIRCVL 374          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.566e-25
Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            +D+N  +   AKKFG T+F++       VQ VI ++T+GGVD + +CTG+V  M    +  H GWG   ++GV          P  ++  R + G+ FG  K RS+LP+ V++YM    +++++IT+  P   INKAFD M  G+ IRC++ M+
Sbjct:  224 IDINADKEVYAKKFGATDFIDSSKVKDLVQYVI-DVTDGGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGRSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVVDMN 376          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.943e-24
Identity = 53/151 (35.10%), Postives = 87/151 (57.62%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD N  +F +AK  G TE ++P+D++KP+QQV+ +M N G D + E TG+ + + +A    H   GV V+VG          +     + RTLKG+  G +K + ++P +V  Y  K+  L+  ITH +   ++N+A  LM +G+ IRC++
Sbjct:  223 VDTNKDKFAKAKTVGATECIDPQDFEKPIQQVLFDMMNDGADFTFEVTGNPETVETALASCHKDHGVCVIVGSLASWIQLNINSHLFFSGRTLKGSVLGGWKTKEEIPKLVSDYTAKKFNLDPLITHTLTLDKVNEAIQLMKNGQCIRCVL 373          
The following BLAST results are available for this feature:
BLAST of DR908604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH7_RAT5.317e-2936.84Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
FADH_YEAST2.020e-2835.67S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADH8_RANPE2.639e-2838.82NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH1A_UROHA2.639e-2838.56Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
FADH_CANMA1.310e-2739.87S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH6_PONAB4.977e-2736.84Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
FADH_PICPA7.186e-2637.42S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH6_RAT2.091e-2536.84Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
FADH1_SCHPO3.566e-2537.01Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH6_PERMA3.943e-2435.10Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16732 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908604 ID=DR908604; Name=DR908604; organism=Citrus sinensis; type=EST; length=609bp
GGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGT
TACCGAGTTTGTGAATCCAAAAGATTATGACAAACCTGTTCAACAGGTGA
TTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGA
AGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGATGGTTGGGG
TGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTC
ATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGC
AACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAAATACATGAA
CAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGCCCTTCTCGG
AGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGCATTAGGTGC
ATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAAT
GGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATATATTACCCC
GAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTT
TCAAAGAGT
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