DR908604

Overview
NameDR908604
Unique NameDR908604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.802e-35
Identity = 69/157 (43.95%), Postives = 103/157 (65.61%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNP-KDYD--KPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 462
            G+D N ++F   K FG TEF+NP KD    K +QQ + ++T+GGVD S EC G+V  M +A EC H GWGV+ +VGV        T P  L+  R  KG+ FG  K RS LPS+++KYM+K++++++++T   P +EIN AFD+M  G+S+R ++ +
Sbjct:  223 GIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLVTGRVWKGSAFGGVKSRSQLPSIIDKYMDKKLKVDEYVTFTYPLNEINTAFDVMHEGKSLRSVVNL 379          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.485e-35
Identity = 67/151 (44.37%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VGVP        +PM LL  RT KG  +G +K R  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  223 VDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAVYGGFKSREGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.469e-35
Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            G+D+N  +F  AKK G T+ +NP+D  KPVQ++IAEMTNGGVD ++EC G+   M +AFE    GWG  V+VGV   + +    PM L+  R +K TFFG +K    +P +V  YM K+ +L+  ++H +P  +IN AFDLM +G+S R I+
Sbjct:  226 GIDINKDKFPLAKKLGATDCLNPQDIRKPVQEIIAEMTNGGVDFAIECIGNPDVMKAAFESTTVGWGTCVIVGVAVGEQSIPFSPMQLIMGRKIKATFFGGWKSVKSVPKLVSDYMAKKFDLDALVSHTLPLDKINDAFDLMNAGKSNRTIL 377          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 8.469e-35
Identity = 69/151 (45.70%), Postives = 100/151 (66.23%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G T+ +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M SA    H   GV+V+VGVP    +   +PM+LL  RT KG  FG +K +  +P +V  +M K+  LE  ITH +PF +IN+AFDL+ +G+SIR ++
Sbjct:  224 VDINKDKFAKAKELGATDCINPQDYTKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHSACGVSVIVGVPPSAQSLSVNPMSLLLGRTWKGAIFGGFKSKDAVPKLVADFMAKKFPLEPLITHVLPFEKINEAFDLLRAGKSIRTVL 374          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.445e-34
Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            G+D+N  +F +AK+ G TE +NP D  KP+Q+V++EMT GGVD S E  G +  M +A  C  D +G +V+VGVP   +    +PM L   RT KG+ FG +K +  +P +V  YM K++ L+  ITH +PF +IN+ F+L+ +G+SIR ++
Sbjct:  221 GIDINKDKFAKAKELGATECINPLDCKKPIQEVLSEMTGGGVDYSFEVIGRIDTMTAALACCQDNYGTSVIVGVPPASEKITFNPMMLFTGRTWKGSVFGGWKSKESVPKLVADYMEKKINLDGLITHTLPFDKINEGFELLRTGKSIRSVL 372          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34
Identity = 66/151 (43.71%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VGVP        +PM LL  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  223 VDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34
Identity = 66/151 (43.71%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M+++  C H+  G +V+VGVP        +PM LL  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  223 VDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.218e-34
Identity = 68/151 (45.03%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G TE +NP DY KP+Q+V+ EMT+GGVD S E  G +  M S+    H   GV+V+VGVP    +   +PM+LL  R+ KG  FG +K +  +P +V  +M K+  LE  ITH +PF +IN+AFDL+ +G+SIR ++
Sbjct:  223 VDINKDKFAKAKELGATECINPLDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSSLLSCHASCGVSVIVGVPPNAQSLSVNPMSLLMGRSWKGAIFGGFKSKDSVPKLVTDFMAKKFPLEPLITHVLPFEKINEAFDLLRAGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.218e-34
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G TE +NP+DY KP+Q+V+ EMT+GGVD S E  G +  M SA    H   GV+V+VGVP        +PM LL  RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+AFDL+ SG+SIR ++
Sbjct:  223 VDINKDKFAKAKELGATECINPQDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPMLLLLGRTWKGAIFGGFKSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDLLRSGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.203e-34
Identity = 65/153 (42.48%), Postives = 101/153 (66.01%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 462
            +D NP +F +A+ FG T+ V P   DKP+ QV+ EMT+GG+D + EC G+V  M +A E  H GWGV+V++GV        T P  L+  RT KG  FG +K    +P +V+ YM  ++ +++F++H++PF  IN+AFDLM +G+SIR ++++
Sbjct:  224 IDRNPDKFEKARIFGATDCVVPDASDKPISQVLGEMTDGGLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVTGRTWKGAAFGGWKSVESVPKLVDDYMAGKIMVDEFVSHSLPFDSINEAFDLMHAGKSIRTVLQL 376          
The following BLAST results are available for this feature:
BLAST of DR908604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADHX_DICDI3.802e-3543.95Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1B_PAPHA6.485e-3544.37Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH4_STRCA8.469e-3545.39Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1_RAT8.469e-3545.70Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1_ALLMI1.445e-3442.76Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH1B_PANTR1.887e-3443.71Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN1.887e-3443.71Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1_PERMA3.218e-3445.03Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_MOUSE3.218e-3446.36Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADHX_MYXGL4.203e-3442.48Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16732 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908604 ID=DR908604; Name=DR908604; organism=Citrus sinensis; type=EST; length=609bp
GGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGT
TACCGAGTTTGTGAATCCAAAAGATTATGACAAACCTGTTCAACAGGTGA
TTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGA
AGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGATGGTTGGGG
TGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTC
ATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGC
AACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAAATACATGAA
CAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGCCCTTCTCGG
AGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGCATTAGGTGC
ATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAAT
GGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATATATTACCCC
GAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTT
TCAAAGAGT
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