DR908604

Overview
NameDR908604
Unique NameDR908604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.035e-32
Identity = 66/152 (43.42%), Postives = 97/152 (63.82%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            GVD+N  +F +AK+ G T+ VNPKD+ KP+ +V+ EMT  GVD S E  G  + M +A    H  +GV+V+VGVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PF +IN+ FDL+ +G+SIR ++
Sbjct:  221 GVDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVGVPPAAEKLSFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMEKKFVLDPLITHTLPFHKINEGFDLLRTGKSIRSVL 372          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32
Identity = 65/151 (43.05%), Postives = 99/151 (65.56%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G TE +NP+DY KP+Q+VI E+++GGVD S E  G +  +++A    H   G +V+VGVP    +   +PM LL+ RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN+ FDL+ SG+SIR I+
Sbjct:  223 VDINKDKFPKAKEVGATECINPQDYKKPIQEVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVGVPPDSQSLTVNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFSLDPLITNVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.306e-32
Identity = 64/151 (42.38%), Postives = 96/151 (63.58%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            +D+N  +F +AK+ G TE VNPKD+ KP+ +V+ EMT  GVD S E  G ++ M  A    H  +GV+V+VGVP         PM + + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PF++IN+ FDL+ +G+SIR ++
Sbjct:  223 IDINKDKFAKAKELGATECVNPKDFKKPIHEVLTEMTGKGVDYSFEVIGRIETMTEALASCHYNYGVSVIVGVPPAAQKISFDPMLIFSGRTWKGSVFGGWKSKDAVPKLVADYMKKKFVLDPLITHTLPFTKINEGFDLLRTGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.495e-31
Identity = 64/151 (42.38%), Postives = 97/151 (64.24%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            +D+N  +F +AK  G T+ +NP++ DKPVQ VI E+T GGVD S++C G+ Q + +A +C   GWG   +VG   K D      ++++  R++ GTFFG +K    +P++V  Y NK+ +L+  +THA+PF  IN A DLM  G+SIR I+
Sbjct:  227 IDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL 375          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.495e-31
Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            GVD+N  +F +AK+ G TE +NP D+ KP+ +V+ ++T G GVD S E  G  + MISAF   H   G +V+VGVP        +P+ L   RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ FDL+ SG+SIR ++
Sbjct:  221 GVDINKDKFAKAKEMGATECINPLDFKKPINEVLFDLTGGEGVDYSFEVIGRTETMISAFTSCHQNLGTSVVVGVPPNASMITYNPLMLFTGRTWKGCVFGGWKSKDSVPKLVSDFMQKKFVLDPLITHTLPFEKINEGFDLLRSGKSIRTVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31
Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            +D+N  +F +AK+ G T+ VNPKD+ KP+ +V+ EMT  GVD S E  G  + M +A    H  +GV+V++GVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  LE  ITH +PF +IN+ FDL+  G+SIR ++
Sbjct:  223 IDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADH1_ANAPL (Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrhynchos GN=ADH1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.952e-31
Identity = 63/151 (41.72%), Postives = 97/151 (64.24%), Query Frame = 1
Query:    4 VDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            VD+N  +F +AK+ G T+ +NPKD+ +P+ +V+  MT  GVD S E  G ++ M++A    H  +GV+V+VGVP         PM L + RT KG+ FG +K +  +P +V  YM K+  L+  ITH +PFS+IN+ FDL+ +G+SIR ++
Sbjct:   33 VDINSDKFAKAKELGATDCINPKDHKEPIHKVLIGMTGYGVDYSFEVIGRIETMVAALASCHYNYGVSVIVGVPPAAQNITFDPMLLFSGRTWKGSVFGGWKSKDSVPKLVADYMKKKFVLDPLITHTLPFSKINEGFDLLRAGKSIRSVL 183          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.550e-31
Identity = 65/158 (41.14%), Postives = 98/158 (62.03%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCII 456
            GVDLN  +   A+ FG+T F+NPK+ +  VQ+++  +T       GG D S +CTG+V+ M  A EC H GWG ++++GV        T P  L+  R  KGT FG  + R+D+P +V+ YM+ ++E++  ITH +   +INK FDLM +GESIR ++
Sbjct:  217 GVDLNDDKKPMAEHFGMTHFINPKNCENVVQEIV-NLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.681e-31
Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDY-DKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRMD 465
            GVDLNP +F   KKFG T+F+N     +  + +VI EMT GGVD S EC G    +  AF     G G  V++G+            +LL  R + G+ FG  KP+ D+P +V+ Y+ KE+ L+ FITH + F EINKAFDL++ G+S+RCI+ M+
Sbjct:  233 GVDLNPEKFELGKKFGFTDFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGKSLRCILWMN 388          
BLAST of DR908604 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.681e-31
Identity = 57/154 (37.01%), Postives = 98/154 (63.64%), Query Frame = 1
Query:    1 GVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIAEMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKEMELEKFITHAVPFSEINKAFDLMLSGESIRCIIRM 462
            G+D+NP +F   ++ G++EF+NPK+ DK V + + E+T GGV+ S EC GS++A+  AF   + G GV V++GV         HPM L   R++  + FG +KP++ LP  + + +   + L+ FI+H +PF +IN+A  L+  G+++RC++ +
Sbjct:  227 GIDINPDKFQLGREAGISEFINPKESDKAVHERVMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLGVHASPQLLPIHPMELFQGRSITASVFGGFKPKTQLPFFITQCLQGLLNLDLFISHQLPFHDINEAMQLLHQGKALRCLLHL 380          
The following BLAST results are available for this feature:
BLAST of DR908604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_STRCA1.035e-3243.42Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_RABIT1.352e-3243.05Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_COTJA2.306e-3242.38Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH4_MOUSE1.495e-3142.38Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_NAJNA1.495e-3142.48Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_APTAU1.952e-3142.38Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_ANAPL1.952e-3141.72Alcohol dehydrogenase 1 (Fragment) OS=Anas platyrh... [more]
FADH_PARDE2.550e-3141.14S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADHL5_ARATH5.681e-3142.95Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADHL4_ARATH5.681e-3137.01Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16732 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908604 ID=DR908604; Name=DR908604; organism=Citrus sinensis; type=EST; length=609bp
GGTGTTGATTTGAACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGT
TACCGAGTTTGTGAATCCAAAAGATTATGACAAACCTGTTCAACAGGTGA
TTGCTGAAATGACCAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGA
AGCGTCCAGGCCATGATCTCAGCATTTGAATGCGTTCACGATGGTTGGGG
TGTTGCTGTGCTTGTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTC
ATCCCATGAATCTGCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGC
AACTACAAACCTCGCTCTGATCTTCCTTCAGTTGTTGAAAAATACATGAA
CAAGGAGATGGAGCTTGAGAAATTCATCACTCATGCTGTGCCCTTCTCGG
AGATAAACAAGGCATTTGACCTCATGCTTTCGGGAGAAAGCATTAGGTGC
ATCATTCGCATGGATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAAT
GGAGGCAGAATGAAGATGATCACATAATTTTCCAAGTTATATATTACCCC
GAGAATAAGTAATTTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTT
TCAAAGAGT
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