DR908600

Overview
NameDR908600
Unique NameDR908600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF_PRUAV (Profilin OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.874e-58
Identity = 103/131 (78.63%), Postives = 118/131 (90.08%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQAYVDDHL+C+I+GN L+AAAI+G DGSVW+QS  FP  KPEEI  I+ D ++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+T+KKT+ ALIIGIYDEP+TPGQCNMIVERLGDYLI+QGL
Sbjct:    1 MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDLDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF1_OLEEU (Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.874e-58
Identity = 104/134 (77.61%), Postives = 119/134 (88.81%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQAYVDDHL+C+IEG+    L+AAAI+GHDGSVWAQS  FPQ KPEE+ GIM DFNEPG LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+TIKKT  AL+ GIY+EP+TPGQCNM+VERLGDYL++QG+
Sbjct:    1 MSWQAYVDDHLMCDIEGHEDHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVEQGM 134          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF2_PARJU (Profilin-2 OS=Parietaria judaica GN=PRO2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.196e-58
Identity = 105/132 (79.55%), Postives = 121/132 (91.67%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEI-EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQAYVDDHL+C++ +GN L++AAIIGHDGSVWAQS NFPQLKPEE+TGIMNDFNE G LAPTGL+LGGTKYMVIQGE GAVI GKKG GG T+KKT  A++IGIYDEPMTPGQCN++VERLGDYL++QG+
Sbjct:    1 MSWQAYVDDHLMCDVGDGNTLASAAIIGHDGSVWAQSANFPQLKPEEVTGIMNDFNEGGFLAPTGLFLGGTKYMVIQGESGAVI-GKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGM 131          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF3_OLEEU (Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.174e-58
Identity = 104/134 (77.61%), Postives = 118/134 (88.06%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQAYVDDHL+C+IEG+    L+AAAI+GHDGSVWAQS  FPQ KPEE+ GIM DFNEPG LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+TIKKT  AL+ GIY+EP+TPGQCNM+ ERLGDYL++QGL
Sbjct:    1 MSWQAYVDDHLMCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVAERLGDYLLEQGL 134          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF2_MAIZE (Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 4.174e-58
Identity = 99/131 (75.57%), Postives = 118/131 (90.08%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQAYVD+HL+CEIEG+HL+AAAI+GHDG+ WAQS  FP+ K E++  IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT  AL++GIYDEPMTPGQCNM+VERLGDYL++QG+
Sbjct:    1 MSWQAYVDEHLMCEIEGHHLAAAAIVGHDGAAWAQSTAFPEFKTEDMANIMKDFDEPGHLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLLEQGM 131          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF5_ARATH (Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.451e-58
Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQ YVDDHL+C++ GN L+AAAI+G DGSVWAQS NFPQ+KPEEI GI +DF  PGTLAPTGL+LGG KYMVIQGEP AVIRGKKG GGVTIKKT+ AL+ GIYDEPMTPGQCNM+VE LG+YLI+ GL
Sbjct:    1 MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESGL 131          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF1_SOLLC (Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.120e-58
Identity = 102/132 (77.27%), Postives = 119/132 (90.15%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 397
            MSWQ YVDDHL+C+IEG  +HLS+AAI+G DGSVWAQS NFP+ K EEIT IM DF+EPG LAPTGL+L GTKYMVIQGEPGAVIRGKKGPGG+TIKKT+ ALI G+Y+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    1 MSWQTYVDDHLMCDIEGTGHHLSSAAILGFDGSVWAQSPNFPKFKAEEITNIMKDFDEPGHLAPTGLFLAGTKYMVIQGEPGAVIRGKKGPGGITIKKTAQALIFGVYEEPVTPGQCNMVVEKIGDYLVDQG 132          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.586e-57
Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 400
            MSWQ+YVDDHL+C++EGNHL+AAAI+G DGSVWAQS  FPQLKP+EI GI  DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKGPGGVTIKKT+ AL+ G YDEPMT GQCN++VERLGDYLI+  L
Sbjct:    1 MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF_CROSA (Profilin OS=Crocus sativus PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.072e-57
Identity = 98/130 (75.38%), Postives = 118/130 (90.77%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 397
            MSWQ YVD+HL+C+++G+ L++AAI+GHDGSVWAQS  FP+LKP EIT I+NDFNEPG+LAPTG+Y+ G KYMVIQGEPG VIRGKKG GGVTIKK++ ALI G+YDEPMTPGQCN++VERLGDYLI+QG
Sbjct:    1 MSWQTYVDEHLMCDMDGHVLTSAAILGHDGSVWAQSAGFPELKPAEITAILNDFNEPGSLAPTGMYINGAKYMVIQGEPGVVIRGKKGSGGVTIKKSNMALIFGLYDEPMTPGQCNLVVERLGDYLIEQG 130          
BLAST of DR908600 vs. ExPASy Swiss-Prot
Match: PROF2_TOBAC (Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.615e-57
Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 2
Query:    8 MSWQAYVDDHLLCEIEG---NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 397
            MSWQ YVDDHL+ +IEG   NHL+AAAI+G+DGSVWAQS  FP+ KPEEIT IM DF+EPG LAPTGL+LGG KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI GIY+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    1 MSWQTYVDDHLMADIEGQQGNHLAAAAILGNDGSVWAQSTTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIGDYLVDQG 133          
The following BLAST results are available for this feature:
BLAST of DR908600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PROF_PRUAV1.874e-5878.63Profilin OS=Prunus avium PE=1 SV=1[more]
PROF1_OLEEU1.874e-5877.61Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1[more]
PROF2_PARJU3.196e-5879.55Profilin-2 OS=Parietaria judaica GN=PRO2 PE=1 SV=1[more]
PROF3_OLEEU4.174e-5877.61Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1[more]
PROF2_MAIZE4.174e-5875.57Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2[more]
PROF5_ARATH5.451e-5877.86Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV... [more]
PROF1_SOLLC7.120e-5877.27Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV... [more]
PROF1_ARATH1.586e-5777.86Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV... [more]
PROF_CROSA2.072e-5775.38Profilin OS=Crocus sativus PE=1 SV=1[more]
PROF2_TOBAC4.615e-5776.69Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16728 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-37_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908600 ID=DR908600; Name=DR908600; organism=Citrus sinensis; type=EST; length=610bp
GAAAAAGATGTCGTGGCAAGCTTACGTCGATGATCATCTGTTGTGTGAAA
TTGAGGGTAACCATCTCTCAGCTGCCGCTATCATCGGCCACGACGGCAGC
GTTTGGGCCCAGAGTGAAAACTTCCCTCAGTTAAAACCTGAGGAAATAAC
TGGTATCATGAATGACTTTAATGAACCTGGAACACTAGCACCAACTGGAC
TGTATCTTGGTGGCACAAAATATATGGTGATCCAGGGTGAGCCAGGTGCT
GTCATCCGAGGGAAGAAGGGCCCTGGTGGTGTTACCATCAAGAAGACCAG
TGCGGCCTTAATCATTGGAATCTATGATGAGCCGATGACCCCTGGGCAGT
GCAACATGATTGTTGAAAGGCTTGGTGATTATCTCATTGATCAGGGTCTT
TAGGTGGTTTGCATGTCCGCTAATTTGTTTCATTTCTTGGCTTCCCTAAA
AAGCTCGCACTGTTGAACTTCGGTGTAATAATATTACAGTATTCAAAGTT
ATGGGAACTGTGTGTGGAAAGGAAAGGTTTGGTGCATGTGGAAGTTCTTG
ATATCAGCTATTTGTAGTATTGTTATGGTTGTCGAGGTACTTTACCAATC
ACTATTACAG
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