DR908588

Overview
NameDR908588
Unique NameDR908588
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPKB_ORYSJ (CBL-interacting protein kinase 11 OS=Oryza sativa subsp. japonica GN=CIPK11 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 2
Query:   23 KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVVWK-SGDE 229
            KK+N  L+L   K G+KG L +  EIFEV PS  +VEL+K+ GDT+E+ K  K ++   LKD+VW   GDE
Sbjct:  369 KKDNGVLRLAAPKEGKKGFLELDAEIFEVTPSFLLVELKKTNGDTMEYRKLVKEDIRPALKDIVWVWQGDE 439          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   23 KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFY-KNLSTGLKDVVW 214
            +  +FK+K++G+  GRKG LS+  E+FEVAP + +VE  KS GDTLE+ + Y + +   L D+VW
Sbjct:  367 RTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVW 431          
BLAST of DR908588 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   23 KKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHK-FYKNLSTGLKDVVW 214
            KK+   LK++G K GRKG + +  EIFEV P+ ++VEL+K+ GDTLE+ K   + +   LKD+VW
Sbjct:  364 KKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVW 428          
The following BLAST results are available for this feature:
BLAST of DR908588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CIPKB_ORYSJ6.530e-1149.30CBL-interacting protein kinase 11 OS=Oryza sativa ... [more]
CIPK5_ARATH8.528e-1146.15CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPK2_ORYSJ8.528e-1147.69CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16716 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-39_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908588 ID=DR908588; Name=DR908588; organism=Citrus sinensis; type=EST; length=612bp
ATCGCCTTTGGGTTTTGATGTGAAGAAAAATAATTTCAAGTTGAAGCTTC
AAGGGGAAAAAACTGGACGCAAGGGTCATTTATCTGTTGCAACAGAGATT
TTTGAGGTGGCCCCTTCACTTTACATGGTTGAGCTTCGAAAATCTGGAGG
AGATACCTTAGAATTTCACAAGTTTTACAAAAACCTTTCGACTGGGCTGA
AAGATGTTGTTTGGAAATCAGGAGATGAAACAATTGTTGAAGGATCTGCA
GTCGCTGGTGGCGCAGGGTCTCAATAGCGGATTTCCTTTCATGACTTGCA
CTGCTGAATATCTCCAGCAAATATATATATTGCTTTTGCACCATTGTATC
TCAGCTTTGTATTTTATCCTCTAGGCCATGTGTTTCCTTCATTTGTGATT
CAGAACTCACTTCTCGTGTACCTTGGTTTGGCTTTTGTGTGGTTTCAGAC
TTCCAGTTGTATCATCTCAACGGATATTGAACGTAGTCAATTACCTGCAA
ATAATCAAAAAGACTCTCAGTCCACTGTCATTTTCATTTTGTTTGTTTTT
AGTGACTTGTCTATGGACCAGAAAATTCAATAAAAATAATATATTGTAAA
AAAAAAAAAAAA
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