DR908561

Overview
NameDR908561
Unique NameDR908561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_KLUMA (Orotidine 5'-phosphate decarboxylase OS=Kluyveromyces marxianus GN=URA3 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAK 421
            AE+SS G+LA G+YT   V+IA+   DFVIGFI+ N     G      ++  TPGV +   GD LGQQY T   V+   GSDIIIVGRG+  K  DP +    YR  GW+AYL +
Sbjct:  151 AELSSKGSLAHGEYTRGTVEIAKSDKDFVIGFIAQNDMG--GREEGYDWLIMTPGVGLDDKGDALGQQYRTVDEVVAG-GSDIIIVGRGLFAKGRDPVVEGERYRKAGWDAYLKR 262          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_COCPO (Orotidine 5'-phosphate decarboxylase OS=Coccidioides posadasii GN=URA3 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 2
Query:    5 IISGPGIVDXXXXXXXXXXXXXXXX------AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFI---SVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            ++ GPGI+D                      A M+S G+LA G YT  +V++A  +  FV+GF+   S+      G   +  F+  T GV +   GD LGQQY TP S I   G+D II GRGI  A DP  AAR Y+  GW+AYL +
Sbjct:  125 VLPGPGIIDALAQVASAPDFPHASDRGLLILATMTSKGSLATGQYTELSVELARKYKGFVLGFVASRSLEGVETAGKADDEDFVLFTTGVNLASKGDALGQQYQTPESAI-GGGADFIISGRGIYAAPDPVDAARRYQKAGWDAYLKR 271          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_COCIM (Orotidine 5'-phosphate decarboxylase OS=Coccidioides immitis GN=URA3 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 2
Query:    5 IISGPGIVDXXXXXXXXXXXXXXXX------AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFI---SVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 421
            ++ GPGI+D                      A M+S G+LA G YT  +V++A  +  FV+GF+   S+      G   +  F+  T GV +   GD LGQQY TP S I   G+D II GRGI  A DP  AAR Y+  GW+AYL +
Sbjct:  125 VLPGPGIIDALAQVASAPDFPHASDRGLLILATMTSKGSLATGQYTELSVELARKYKGFVLGFVASRSLEGVETAGKADDEDFVLFTTGVNLASKGDALGQQYQTPESAI-GGGADFIISGRGIYAAPDPVDAARRYQKAGWDAYLKR 271          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_CEPAC (Orotidine 5'-phosphate decarboxylase OS=Cephalosporium acremonium GN=PYR4 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.565e-19
Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKG--------GDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 412
            A+MSSAGN    +YT A V+ A +H DFV+GF+S    +   +  +  FI  TPG Q+           GD  GQQYNTP  +I   G+DI+IVGRGI+KA D    A  YR   W+AY
Sbjct:  256 AQMSSAGNFMNAEYTQACVEAAREHKDFVMGFVSQEALN---SQPDDDFIHMTPGCQLPPEHEEDAELRGDGKGQQYNTPEKLIGVCGADIVIVGRGILKAGDLQHEAERYRSAAWKAY 371          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_TORDE (Orotidine 5'-phosphate decarboxylase OS=Torulaspora delbrueckii GN=URA3 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18
Identity = 55/116 (47.41%), Postives = 68/116 (58.62%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKC 424
            AE+SS G+LA G+YT   V+IA+   DFVIGFI+       G      ++  TPGV +   GD LGQQY T   V+   GSDIIIVGRG+  K  DP +    YR  GWEAY  +C
Sbjct:  151 AELSSKGSLAHGEYTQGTVEIAKTDKDFVIGFIAQRDMG--GREEGYDWLIMTPGVGLDDKGDALGQQYRTVDEVV-STGSDIIIVGRGLFAKGRDPRVEGERYRKAGWEAYEKRC 263          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_HANAN (Orotidine 5'-phosphate decarboxylase OS=Hansenula anomala GN=URA3 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18
Identity = 56/117 (47.86%), Postives = 69/117 (58.97%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKCS 427
            AE+SS G+LAKG+YT   V IA+   DFVIGFI+ N     G      ++  TPGV +   GD LGQQY +   V+   GSDIIIVGRG+  K  DP +    YR  GW AYL + S
Sbjct:  152 AELSSKGSLAKGEYTKQTVDIAKTDKDFVIGFIAQNDMG--GRDEGFDWLIMTPGVGLDDKGDGLGQQYRSVSEVVAG-GSDIIIVGRGLFGKGRDPKVEGERYRSAGWNAYLKRTS 265          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_SACFI (Orotidine 5'-phosphate decarboxylase OS=Saccharomycopsis fibuligera GN=URA3 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.461e-18
Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAA-DPALAAREYRLQGWEAYLAKCS 427
            AE+SS G++A G+YT   + IA    +FV+GFI+           +  ++  TPGV +   GD LGQQY T   V+   GSDIIIVGRG+I A  DP      YR  GW+AYLA+ S
Sbjct:  151 AELSSKGSIATGEYTEKTIDIARSDKEFVVGFIAQRKIE--AKDDDEDWVVMTPGVGLDDKGDALGQQYRTVSEVVTGAGSDIIIVGRGLIGAGRDPVAEGLRYRKAGWDAYLARLS 265          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_SACEX (Orotidine 5'-phosphate decarboxylase OS=Saccharomyces exiguus GN=URA4 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.908e-18
Identity = 55/120 (45.83%), Postives = 71/120 (59.17%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKCS*SS 436
            AE+SS G+LA G+YT   V+IA+    FV GFI+       G      ++  TPGV +   GD LGQQY T   V+   GSDIIIVGRG+  K  DP   +R YR  GW+AYL +C+ +S
Sbjct:  151 AELSSKGSLAHGEYTTGTVEIAKTDKQFVFGFIAQRGMG--GRDEGFDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFGKGRDPTAESRRYRDAGWDAYLKRCNAAS 267          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_KLULA (Orotidine 5'-phosphate decarboxylase OS=Kluyveromyces lactis GN=URA3 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.492e-18
Identity = 56/117 (47.86%), Postives = 68/117 (58.12%), Query Frame = 2
Query:   80 AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKCS 427
            AE+SS G+LA G+YT   V IA+   DFVIGFI+ N     G      ++  TPGV +   GD LGQQY T   V+   GSDIIIVGRG+  K  DP +    YR  GWEAY  + S
Sbjct:  151 AELSSKGSLAHGEYTKGTVDIAKSDKDFVIGFIAQNDMG--GREEGFDWLIMTPGVGLDDKGDALGQQYRTVDEVV-SGGSDIIIVGRGLFAKGRDPKVEGERYRNAGWEAYQKRIS 264          
BLAST of DR908561 vs. ExPASy Swiss-Prot
Match: PYRF_YEAST (Orotidine 5'-phosphate decarboxylase OS=Saccharomyces cerevisiae GN=URA3 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.251e-18
Identity = 60/145 (41.38%), Postives = 73/145 (50.34%), Query Frame = 2
Query:    2 HIISGPGIVDXXXXXXXXXXXXXXXX---AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGII-KAADPALAAREYRLQGWEAYLAKC 424
            H + GPGIV                    AE+S  G+LA G+YT   V IA+   DFVIGFI+       G      ++  TPGV +   GD LGQQY T   V+   GSDIIIVGRG+  K  D  +    YR  GWEAYL +C
Sbjct:  122 HGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMG--GRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRC 263          
The following BLAST results are available for this feature:
BLAST of DR908561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_KLUMA8.565e-1947.83Orotidine 5'-phosphate decarboxylase OS=Kluyveromy... [more]
PYRF_COCPO8.565e-1938.51Orotidine 5'-phosphate decarboxylase OS=Coccidioid... [more]
PYRF_COCIM8.565e-1938.51Orotidine 5'-phosphate decarboxylase OS=Coccidioid... [more]
PYRF_CEPAC8.565e-1944.54Orotidine 5'-phosphate decarboxylase OS=Cephalospo... [more]
PYRF_TORDE1.119e-1847.41Orotidine 5'-phosphate decarboxylase OS=Torulaspor... [more]
PYRF_HANAN1.119e-1847.86Orotidine 5'-phosphate decarboxylase OS=Hansenula ... [more]
PYRF_SACFI1.461e-1844.44Orotidine 5'-phosphate decarboxylase OS=Saccharomy... [more]
PYRF_SACEX1.908e-1845.83Orotidine 5'-phosphate decarboxylase OS=Saccharomy... [more]
PYRF_KLULA2.492e-1847.86Orotidine 5'-phosphate decarboxylase OS=Kluyveromy... [more]
PYRF_YEAST4.251e-1841.38Orotidine 5'-phosphate decarboxylase OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16689 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908561 ID=DR908561; Name=DR908561; organism=Citrus sinensis; type=EST; length=616bp
TCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAAATTAAAGGGAT
TGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGAGCTCAGCTGGT
AACCTAGCAAAGGGAGACTATACAGCAGCAGCTGTGAAAATTGCCGAGGA
TCATTCTGATTTTGTCATTGGATTCATCTCAGTTAATCCAGCATCATGGC
CAGGGGCACCAGTCAATCCAGCCTTTATTCAAGCAACCCCTGGAGTTCAA
ATGGTAAAGGGAGGTGATGATCTAGGCCAACAATATAACACTCCATACTC
GGTCATCTATGATAGGGGTAGTGACATAATTATTGTGGGTCGTGGAATTA
TAAAGGCAGCAGACCCTGCATTGGCAGCCCGTGAGTACCGGCTTCAAGGA
TGGGAGGCCTACTTGGCTAAGTGCAGCTGATCCTCCATTTAGGTCTGGAC
TTCTGCTCGCTTCAACGGTTGCGATAATGAACAGATGAGTCAAGTTCTGT
TTAATATACCATGCATTGGTATGTCTTATGAAACCGAGAGAGTTTGAAGC
TTTTGGCTGCATTGTACTTATAGTAACTTCTCAAGTCTGGTAATGCTGCT
TGTCTGGTTTTCCCAA
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