EY680403

Overview
NameEY680403
Unique NameEY680403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.101e-46
Identity = 100/243 (41.15%), Postives = 144/243 (59.26%), Query Frame = 1
Query:   58 ARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN----WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            AR+ F+GGN+KCNG+ + +K  V+ +  A                       +       +AAQN ++   GA+TGE S EML ++ +  VI+GHSERR ++ E+++    K   AL +G+ VI CVGETL++R++  T+ V   Q +A+ +++      W  VV+AYEPVW+IGTG VATP QA+EVH  LRKW  + V AE A   +IIYGGS  G+NC++L   P+ +GFL  G   KPE
Sbjct:    3 ARRPFIGGNFKCNGSLDFIKSHVAAI-AAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPE 244          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.324e-43
Identity = 111/236 (47.03%), Postives = 137/236 (58.05%), Query Frame = 1
Query:   61 RKFFVGGNWKCN----GTSEEVKKIVSTL-NEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            RK FV GNWK N    G      +I+  L +EA                      +S ++    +AAQNC+    GA+TGE+SA ML N    +VILGHSERR   NE+++ V  KV  ALS  L VI CVGETLEQRESG T +VV  Q +   + ++  D  +VV+AYEPVWAIGTGK ATP QAQEVHA +R  +KD    EVA   +I YGGS K +N KEL   PD +G L
Sbjct:    2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIK----LAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDIDGGL 233          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.260e-43
Identity = 100/231 (43.29%), Postives = 134/231 (58.01%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            RK  V GNWK N T +E   +   LNEA                        L+  +   V A+NC  ++ GA+TGEVSA M+ +    +VILGHSERRA   E+ + + DKV  AL+ GL  I C+GE LE+RE+     VVA Q  ++ +    ++  +VLAYEPVWAIGTGK A+PAQAQE+HA +R  + +    E+A +T I+YGGS K +N KEL A PD +G L
Sbjct:    2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGL 232          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.260e-43
Identity = 100/231 (43.29%), Postives = 134/231 (58.01%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            RK  V GNWK N T +E   +   LNEA                        L+  +   V A+NC  ++ GA+TGEVSA M+ +    +VILGHSERRA   E+ + + DKV  AL+ GL  I C+GE LE+RE+     VVA Q  ++ +    ++  +VLAYEPVWAIGTGK A+PAQAQE+HA +R  + +    E+A +T I+YGGS K +N KEL A PD +G L
Sbjct:    2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGL 232          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.132e-42
Identity = 98/231 (42.42%), Postives = 132/231 (57.14%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            RK  V GNWK N T +E   +   LNEA                        L+  +   V A+NC  +  GA+TGEVSAEM+ +    +VILGHSERRA   E+   + +KV  AL+ GL  I C+GE LE+RE+     VVA Q +++      ++  ++LAYEPVWAIGTGK A+P QAQE+HA +R  + D    E+A +T I+YGGS K +N KEL + PD +G L
Sbjct:    2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKASGAYTGEVSAEMVASTGAKYVILGHSERRAYYGETVAILEEKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQMESVFSLSAEDFSKIILAYEPVWAIGTGKTASPEQAQEIHAFIRSIVADKYGKEIADNTSILYGGSCKPSNAKELFSNPDVDGGL 232          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_BACV8 (Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.558e-41
Identity = 98/231 (42.42%), Postives = 132/231 (57.14%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAE-KISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            RK  V GNWK N   +E   +   LNEA                        ++ ++   V A+NC  +  GA+TGEVSAEM+ +    +VILGHSERRA  +E+ + + +KV  AL+  LK I C+GE LE+RE+     VVA Q  ++      ++  ++LAYEPVWAIGTGK AT  QAQE+HA +R  + D    EVA +T I+YGGS K +N KEL A PD +G L
Sbjct:    2 RKNIVAGNWKMNKNLQEGIALAKELNEALAADKPNCDVVICTPFIHLASVTPIVDKAVIGVGAENCADKVSGAYTGEVSAEMVASTGAEYVILGHSERRAYYHETVEILEEKVKLALANNLKPIFCIGEVLEEREANKQNEVVAAQLASVFSLSAEDFSKIILAYEPVWAIGTGKTATAEQAQEIHAFIRSLIADKYGKEVADNTSILYGGSCKPSNAKELFANPDVDGGL 232          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_CHLP8 (Triosephosphate isomerase OS=Chlorobaculum parvum (strain NCIB 8327) GN=tpiA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.010e-40
Identity = 100/239 (41.84%), Postives = 129/239 (53.97%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGT-SEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWGNFPKPE 774
            R+  V GNWK N T +E ++   +   +                       K++  S   +AAQNC     GAFTGEVS  ML      +VILGHSERR L  E+N+ V  KV  AL+ GL+VI CVGETL++RE+G T  +V  Q       +S+   +V+AYEPVWAIGTGK AT  QAQ+VHA +R  ++       A   +I YGGS K +N  EL A PD +G L  G   K E
Sbjct:    2 RRTIVVGNWKMNNTIAESIELATAIAEKVGATKPECEVGIAPTFPALHEVGKTIEWSGVQLAAQNCHYENDGAFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNEIVNRKVKKALAEGLRVILCVGETLDEREAGVTDKIVTAQVVEGLADVSDISTLVIAYEPVWAIGTGKTATKEQAQDVHASIRSTIEKLYGDSAARHLRIQYGGSVKPSNAAELFAMPDIDGGLIGGASLKVE 240          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.722e-40
Identity = 99/230 (43.04%), Postives = 126/230 (54.78%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            RK  V GNWK N T  E  ++ S + +                         ++  +  H+AAQNC     GAFTGEVS  ML      +VI+GHSERR    ++N  V  KV  ALS GL VI CVGETL++RE G T  VV  Q K   E +++  ++V+AYEPVWAIGTGK A+  QAQEVHA +R  +        AA  +I YGGS K +N +EL A PD +G L
Sbjct:    2 RKKIVVGNWKMNKTIAEAVELSSAIIDQLGEVSASCEVGIAPAFPALSGVHGVISGTGIHLAAQNCHYEDDGAFTGEVSVRMLDEAGCSYVIVGHSERRQYFGDTNPVVNLKVKKALSAGLNVILCVGETLDEREKGITTEVVTCQVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIRATVAGLYSEPAAAGVRIQYGGSVKPSNAEELFAMPDIDGGL 231          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.722e-40
Identity = 95/234 (40.60%), Postives = 129/234 (55.13%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFLGWG 756
            R+ F+ GNWK + TS E   +V  L  A                       +L +SD  VAAQNC+    GAFTGEVS  +L +    +VI+GHSERR L  ES+ F+  KV   +  GL  I C+GETLE+RE+  T  V+  Q +   E +  +  + +V+AYEPVWAIGTGK AT +QAQ+ H+ +R  + D   ++VA   +I+YGGS K  N   L   PD +G L  G
Sbjct:    2 RRPFIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQVRIVYGGSVKPGNVDGLLQQPDIDGALVGG 235          
BLAST of EY680403 vs. ExPASy Swiss-Prot
Match: TPIS_HERAR (Triosephosphate isomerase OS=Herminiimonas arsenicoxydans GN=tpiA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.722e-40
Identity = 101/231 (43.72%), Postives = 127/231 (54.98%), Query Frame = 1
Query:   61 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVRAEVAASTKIIYGGSGKGTNCKELAATPDGNGFL 747
            R+  V GNWK NG+      +++ + +AE                       L  S   + AQ+      GA+TGEVS  ML+  +  +VI+GHSERRA   E+N+ V  K   ALS GL  I CVGETLEQRE+G T  VV  Q  A+   I+  D   +V+AYEPVWAIGTGK ATP  AQEVH  LR+ L     A+ A   +I+YGGS K  N KEL A PD +G L
Sbjct:    2 RRKLVAGNWKMNGSLAANALLLAEI-KAEFGNPACDVAVCVPAPYLAQCLSLLSDSTIALGAQDVSSHDSGAYTGEVSTAMLLEFACRYVIVGHSERRAYFGETNELVAQKTVRALSAGLMPIVCVGETLEQREAGQTDEVVGRQIDAVLSSIAENDLAKIVVAYEPVWAIGTGKTATPEMAQEVHVMLRRRLHAK-NAQAATEVRILYGGSMKPDNAKELLAMPDIDGGL 230          
The following BLAST results are available for this feature:
BLAST of EY680403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPI1_GIALA2.101e-4641.15Triosephosphate isomerase OS=Giardia lamblia PE=1 ... [more]
TPIS_CHLT36.324e-4347.03Triosephosphate isomerase OS=Chloroherpeton thalas... [more]
TPIS_BACFR8.260e-4343.29Triosephosphate isomerase OS=Bacteroides fragilis ... [more]
TPIS_BACFN8.260e-4343.29Triosephosphate isomerase OS=Bacteroides fragilis ... [more]
TPIS_BACTN9.132e-4242.42Triosephosphate isomerase OS=Bacteroides thetaiota... [more]
TPIS_BACV81.558e-4142.42Triosephosphate isomerase OS=Bacteroides vulgatus ... [more]
TPIS_CHLP81.010e-4041.84Triosephosphate isomerase OS=Chlorobaculum parvum ... [more]
TPIS_PROA21.722e-4043.04Triosephosphate isomerase OS=Prosthecochloris aest... [more]
TPIS_PELCD1.722e-4040.60Triosephosphate isomerase OS=Pelobacter carbinolic... [more]
TPIS_HERAR1.722e-4043.72Triosephosphate isomerase OS=Herminiimonas arsenic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680403 ID=EY680403; Name=EY680403; organism=Citrus sinensis; type=EST; length=815bp
CTCGTATTTTCGTCTCGCTTTCATCGCCAAACCAAACAAAATTCAATCGT
CGTCATGGCCCGCAAATTCTTCGTCGGCGGCAACTGGAAATGCAATGGGA
CATCTGAGGAAGTGAAGAAGATTGTTTCTACATTGAATGAAGCTGAAGTT
CCTTCTGAGGATGTTGTGGAGGTTGTTGTAAGCCCTCCGTTTGTGTTTCT
TCCTTTGGTCAAGAGTCTGTTGCGGTCTGATTTCCATGTTGCCGCTCAAA
ATTGCTGGGTTCGCAAAGGTGGTGCTTTTACCGGGGAAGTTAGTGCTGAG
ATGCTTGTCAACTTGAGCATTCCTTGGGTCATTCTTGGTCATTCTGAAAG
AAGAGCTCTTTTGAATGAGTCAAATGATTTTGTTGGAGATAAAGTTGCTT
ATGCACTTTCTCGAGGCTTGAAAGTCATTGCTTGTGTTGGAGAGACTCTG
GAACAGCGAGAATCAGGATCTACAGTGGCTGTTGTGGCTGAACAAACAAA
AGCAATCGCAGAAAAAATATCCAACTGGGACAATGTTGTGTTGGCTTATG
AGCCAGTTTGGGCCATTGGTACCGGGAAGGTTGCAACCCCTGCTCAGGCT
CAGGAAGTCCATGCTGAACTGAGGAAATGGCTTAAAGACAATGTCCGTGC
TGAAGTTGCAGCATCAACTAAAATCATCTACGGAGGGTCTGGTAAGGGAA
CAAATTGCAAAGAATTGGCAGCCACACCTGATGGTAATGGGTTTTTGGGT
TGGGGGAACTTTCCAAAGCCCGAGATTCATCAAAATTATCCAGTCCGGCA
CCATGGAAAAAAAAT
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