DR908543

Overview
NameDR908543
Unique NameDR908543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: MFT_ARATH (Protein MOTHER of FT and TF 1 OS=Arabidopsis thaliana GN=MFT PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.559e-44
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 2
Query:   29 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRG--RQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 529
            M+ + DPL VGRV+GDV+D FIP+  M+V Y   K + NG E+ P+  +  P+V+I G      YTL+MTDPDAPSPS+P +RE +HW+V DIPG T+ S GKEI+ Y  P+P VGIHRY+ +LF+Q       V+ P SR +F+TR F+    LGLPVA VYFNAQ+E
Sbjct:    1 MAASVDPLVVGRVIGDVLDMFIPTANMSV-YFGPKHITNGCEIKPSTAVNPPKVNISGHS-DELYTLVMTDPDAPSPSEPNMREWVHWIVVDIPGGTNPSRGKEILPYMEPRPPVGIHRYILVLFRQNSPVGLMVQQPPSRANFSTRMFAGHFDLGLPVATVYFNAQKE 167          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: OV16_ONCVO (OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.629e-19
Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   65 VVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQT-VRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 529
            +V DVV T  P+  +NV YN N  V  G+EL P  +  +P       +  + YTL+MTDPDAPS  +P  RE  HW++ +I G  + S G  +  Y    P+   G+HRYVF+++KQ G  T  +   +R +F    F+ ++ LG PVA  +F A+ E
Sbjct:   42 IVPDVVST-APTKLVNVSYN-NLTVNLGNELTPTQVKNQPTKVSWDAEPGALYTLVMTDPDAPSRKNPVFREWHHWLIINISG-QNVSSGTVLSDYIGSGPRKGTGLHRYVFLVYKQPGSITDTQHGGNRRNFKVMDFANKHHLGNPVAGNFFQAKHE 196          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: D1_ONCVO (Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.132e-17
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 2
Query:   95 PSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQT-VRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 529
            P+  +NV YN N  V  G+EL P  +  +P       +  + YTL+MTDPDAPS  +P  RE  HW++ +I G  + S G  +  Y    P    G+HRYVF+++KQ G  T  +   +R +F    F+ ++ LG PVA  +F A+ E
Sbjct:    6 PTKLVNVSYN-NLTVNLGNELTPTQVKNQPTKVSWDAEPGALYTLVMTDPDAPSRKNPVFREWHHWLIINISG-QNVSSGTVLSDYIGSGPPKGTGLHRYVFLVYKQPGSITDTQHGGNRPNFKVMDFANKHHLGNPVAGNFFQAKHE 151          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: PEBPH_CAEEL (Phosphatidylethanolamine-binding protein homolog F40A3.3 OS=Caenorhabditis elegans GN=F40A3.3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.204e-17
Identity = 58/163 (35.58%), Postives = 82/163 (50.31%), Query Frame = 2
Query:   65 VVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQ--------RGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQ 523
            V+ DV+ +  PS  ++V +NS  +   G+ L P  +   P V    E   + YTLI TDPDAPS  +P  RE  HW+V +IPG  D + G  +  Y    P P  G+HRYV++++KQ         GR T      R  +    F A++ LG PV    F A+
Sbjct:   47 VIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAEP-GALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPG-NDIAKGDTLSEYIGAGPPPKTGLHRYVYLIYKQSGRIEDAEHGRLTNTSGDKRGGWKAADFVAKHKLGAPVFGNLFQAE 207          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: D3_ONCVO (Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15
Identity = 46/131 (35.11%), Postives = 72/131 (54.96%), Query Frame = 2
Query:  146 GHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPG--TTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQT-VRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 529
            G+EL P  +  +P       +  + YTL+MTDPDAPS  +P  RE  HW++ +I G   +  +   + +    PK   G+HRYVF+++KQ G  T  +   +R +F    F+ ++ LG PVA  +F A+ E
Sbjct:    4 GNELTPTQVKNQPTKVSWDAEPGALYTLVMTDPDAPSRKNPVFREWHHWLIINISGQNVSSGTVLSDYIGSGQPKG-TGLHRYVFLVYKQPGSITDTQHGGNRPNFKVMDFANKHHLGNPVAGNFFQAKHE 133          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: TES26_TOXCA (26 kDa secreted antigen OS=Toxocara canis GN=TES-26 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 2
Query:   77 VVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYE--TPKPVVGIHRYVFILFKQRG-------RQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQ 523
            +V T  PS +++V + +N QV  G+ L  A +  +P V    +     YTLIM DPD PS ++    + LHW V +IPG   A  G  + +++  TP    G+HRYVF++++Q            V   + R  F T  F+ +  LG P A  ++ +Q
Sbjct:  106 LVVTSAPSRRVSVTFANNVQVNCGNTLTTAQVANQPTVTWEAQP-NDRYTLIMVDPDFPSAANGQQGQRLHWWVINIPGNNIAG-GTTLAAFQPSTPAANTGVHRYVFLVYRQPAAINSPLLNNLVVQDSERPGFGTTAFATQFNLGSPYAGNFYRSQ 261          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: D2_ONCVO (Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.430e-13
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 2
Query:  221 YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQT-VRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 529
            YTL+MTDPD PS  +P  RE  HW++ +I G  + S G  +  Y    P    G+HRYVF+++KQ G  T  +   +R +F    F+ ++ LG PVA  +F A+ E
Sbjct:    9 YTLVMTDPDVPSRKNPVFREWHHWLIINISG-QNVSSGTVLSDYIGSGPPKGTGLHRYVFLVYKQPGSITDTQHGGNRRNFKVMDFANKHHLGNPVAGNFFQAKHE 113          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: PEBP2_MOUSE (Phosphatidylethanolamine-binding protein 2 OS=Mus musculus GN=Pbp2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.848e-12
Identity = 56/175 (32.00%), Postives = 80/175 (45.71%), Query Frame = 2
Query:   29 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKP-RVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQ----RGRQTVRPPASRDH---FNTRQFSAENGLGLPVAAVYFNAQ 523
            MS  T PL++  V         P   + V Y   +    G  L P  +  +P  +   G D    YTLI+TDPDAPS   P  RE  H++V ++ G  D S G  +  Y    P    G+HRYV+++++Q    R  + +    S DH   F T  F  +  LG PVA   + A+
Sbjct:    5 MSMWTGPLSLHEVDEQ------PQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKPVYREWHHFLVVNMKG-NDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAE 172          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: PEBP1_RAT (Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus GN=Pebp1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11
Identity = 45/136 (33.09%), Postives = 65/136 (47.79%), Query Frame = 2
Query:  146 GHELMPAVIIAKPR-VDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQTVRPPA-------SRDHFNTRQFSAENGLGLPVAAVYFNAQ 523
            G  L P  ++ +P  +   G D    YTL++TDPDAPS  DP  RE  H++V ++ G  D S G  +  Y    P    G+HRYV+++++Q        P        +R  F    F  +  LG PVA   F A+
Sbjct:   38 GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-NDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAE 172          
BLAST of DR908543 vs. ExPASy Swiss-Prot
Match: PEBP1_CANFA (Phosphatidylethanolamine-binding protein 1 OS=Canis familiaris GN=PEBP1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.284e-11
Identity = 50/153 (32.68%), Postives = 72/153 (47.06%), Query Frame = 2
Query:   95 PSVKMNVIYNSNKQVANGHELMPAVIIAKPR-VDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQTVRPP----ASRDH---FNTRQFSAENGLGLPVAAVYFNAQ 523
            P   ++V Y   +    G  L P  +  +P  +   G D    YTL++TDPDAPS  DP  RE  H++V ++ G  D S G  +  Y    P    G+HRYV+++++Q G      P     S DH   F    F  +  LG PVA   + A+
Sbjct:   21 PQHALHVKYTGTEVDELGKVLTPTQVKNRPTSIAWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQSGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGPPVAGTCYQAE 172          
The following BLAST results are available for this feature:
BLAST of DR908543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
MFT_ARATH4.559e-4452.66Protein MOTHER of FT and TF 1 OS=Arabidopsis thali... [more]
OV16_ONCVO6.629e-1937.97OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 ... [more]
D1_ONCVO2.132e-1737.16Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1... [more]
PEBPH_CAEEL6.204e-1735.58Phosphatidylethanolamine-binding protein homolog F... [more]
D3_ONCVO7.584e-1535.11Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3... [more]
TES26_TOXCA2.882e-1432.2826 kDa secreted antigen OS=Toxocara canis GN=TES-2... [more]
D2_ONCVO1.430e-1339.62Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2... [more]
PEBP2_MOUSE7.848e-1232.00Phosphatidylethanolamine-binding protein 2 OS=Mus ... [more]
PEBP1_RAT2.284e-1133.09Phosphatidylethanolamine-binding protein 1 OS=Ratt... [more]
PEBP1_CANFA2.284e-1132.68Phosphatidylethanolamine-binding protein 1 OS=Cani... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16671 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-17_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908543 ID=DR908543; Name=DR908543; organism=Citrus sinensis; type=EST; length=619bp
AGCTTCCATTATTCTCAGCTTACTAAAAATGTCAAGAACGACTGATCCAC
TAGCTGTTGGACGCGTGGTGGGAGATGTGGTGGATACTTTTATTCCTAGT
GTGAAGATGAACGTGATTTATAACTCTAATAAGCAAGTTGCTAATGGCCA
CGAGCTTATGCCTGCTGTCATTATTGCTAAGCCTAGAGTCGATATTGGCG
GCGAGGACATGAGATCAGCTTATACCTTGATTATGACAGACCCTGATGCT
CCAAGCCCTAGTGATCCATGCTTAAGAGAACATCTCCACTGGATGGTGAC
AGACATTCCTGGAACCACTGACGCTTCTTTTGGAAAAGAAATCGTGAGCT
ATGAGACACCAAAACCGGTGGTGGGCATCCACAGATACGTGTTCATATTG
TTTAAGCAGAGAGGCAGGCAAACAGTGAGGCCACCTGCTTCAAGGGACCA
CTTCAACACAAGGCAATTCTCAGCAGAGAATGGCTTAGGCCTCCCTGTTG
CTGCCGTTTACTTCAATGCCCAAAGAGAAACAGCTGCCAGAAGACGATGA
TGATCATTGATTGATTCGTAGAGAAACTTGACGTTGCCTCATGATCGATC
CATTACCAATAAATTTATT
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