DR908540

Overview
NameDR908540
Unique NameDR908540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.357e-63
Identity = 105/136 (77.21%), Postives = 118/136 (86.76%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP N+PKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RHAER P+P   + G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+RSIW+SYWSQADRSLGQK+AS LN++PSI
Sbjct:  357 GPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 7.479e-63
Identity = 105/136 (77.21%), Postives = 121/136 (88.97%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSRYD  RHAE+YP P  V +G+RE+  IEKENNFK+PGERYR++ P+RQERF+ RWI AL DPR+THE+RSIW+SYWSQAD+SLGQKLASRLNVRPSI
Sbjct:  357 GPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62
Identity = 104/136 (76.47%), Postives = 123/136 (90.44%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LP NAPKC H NNH++G MNFMHRDEEV+YFPSR+DP RHAER+PIP  V+TG+R++  IEKENNFKQPGERYR++APDRQERF+ RW+ AL DPRVTHE+RSIW+SYW+QAD+SLGQKLASRLNVRP++
Sbjct:  357 GPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62
Identity = 103/136 (75.74%), Postives = 121/136 (88.97%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL+LP NAPK  H NNH++GFMNF+HRDEEV+YFPSRYDP RHAE++PIP  V +GRREK  IEKENNFKQ GER+RSWAPDRQ+RF+ RW+ AL DPRVTHE+RS+W+SYWSQADRSLGQK+AS LN+RP+I
Sbjct:  357 GPNYLLLPANAPKSAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAEKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.712e-62
Identity = 105/136 (77.21%), Postives = 119/136 (87.50%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL+LP NAPKC H NNHYDG MNFMHRDEEVDYFPSR+DP +HA RYPIPS  + GRREK  IEKENNFKQPGERYRS  P RQERF+NRWI AL DPR+THE+++IW+SYWSQAD+SLGQKLASRL+ +PS+
Sbjct:  357 GPNYLLLPANAPKCSHHNNHYDGLMNFMHRDEEVDYFPSRFDPAKHAPRYPIPSRTLNGRREKMVIEKENNFKQPGERYRSMDPARQERFINRWIDALSDPRLTHEIKAIWLSYWSQADKSLGQKLASRLSSKPSM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.848e-62
Identity = 105/137 (76.64%), Postives = 125/137 (91.24%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE-NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LPVNAPKCPH NNH++GFMNFMHRDEEV+YFPSRYDP RHAE++P+P +V+TG+RE+  I KE NNFKQ G+RYRSWAPDRQ+RF+ R+++AL DPRVT EVR+IW+SYWSQADRSLGQK+ASRLNVRP+I
Sbjct:  356 GPNYLQLPVNAPKCPHHNNHHEGFMNFMHRDEEVNYFPSRYDPCRHAEKFPMPPNVLTGKRERCVIPKENNNFKQAGDRYRSWAPDRQDRFVKRFVEALSDPRVTDEVRNIWISYWSQADRSLGQKIASRLNVRPNI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 4.848e-62
Identity = 105/136 (77.21%), Postives = 121/136 (88.97%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            G NYL LPVNAPKCP+ NNHYDGFMNFMHRDEEVDYF SRYDP RHAE+ PIP+ + +GRREK  IEKE+NF+QPG+RYRSWAPDRQERFL R + AL +PR+THE+RSIWVS+W+Q D+SLGQKLASRLNVRP+I
Sbjct:  357 GTNYLQLPVNAPKCPYHNNHYDGFMNFMHRDEEVDYFQSRYDPVRHAEKVPIPNAICSGRREKCVIEKEDNFRQPGDRYRSWAPDRQERFLCRLVNALSEPRITHEIRSIWVSWWTQCDKSLGQKLASRLNVRPNI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.080e-61
Identity = 100/136 (73.53%), Postives = 124/136 (91.18%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNY++LPVNAPKC H NN YDG+MNF+HRDEEVDYFPS++D TR+AER+P P  ++TG+R+K  IEKENNFKQPG+RYRSWAPDRQ+RF+NRW+KAL +PRVTHE+RS W+SY +QADRSLGQK+ASRLN+RP++
Sbjct:  357 GPNYMLLPVNAPKCAHHNNSYDGYMNFVHRDEEVDYFPSKFDNTRNAERFPTPLRIVTGQRDKCVIEKENNFKQPGDRYRSWAPDRQDRFINRWVKALSEPRVTHEIRSTWISYLTQADRSLGQKVASRLNIRPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.842e-61
Identity = 103/136 (75.74%), Postives = 120/136 (88.24%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LPVNAPKC H NNH++GFMNFMHRDEEV+YFPSR DP R+AE +P+PS + +G+REK  IEKENNFKQPGERYRSWAPDRQERFLNR +  L DPR+THE+R+IW+SYW Q D+SLGQKLA+RLNV+PSI
Sbjct:  357 GPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRCDPARNAESFPVPSAICSGKREKCVIEKENNFKQPGERYRSWAPDRQERFLNRLVGGLSDPRITHELRTIWISYWIQCDKSLGQKLATRLNVKPSI 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.560e-60
Identity = 101/137 (73.72%), Postives = 124/137 (90.51%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYL LPVNAPKCPH NNH++GFMNFMHRDEEV+YFPSRYD  RHAE+YP+P +V++G+RE+  I KEN NFKQ G+RYRSWAPDRQERF+NR+++AL D +VTHEVR+IW+SYW+QADRSLGQK+ASR+N RP++
Sbjct:  356 GPNYLQLPVNAPKCPHHNNHHEGFMNFMHRDEEVNYFPSRYDACRHAEKYPMPPNVLSGKRERCVIPKENHNFKQAGDRYRSWAPDRQERFVNRFVEALSDSKVTHEVRNIWISYWTQADRSLGQKIASRMNARPNM 492          
The following BLAST results are available for this feature:
BLAST of DR908540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CATA3_SOYBN3.357e-6377.21Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_ARATH7.479e-6377.21Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA_SOLAP1.276e-6276.47Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA_PHAAU1.276e-6275.74Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA1_WHEAT3.712e-6277.21Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1[more]
CATA3_CUCPE4.848e-6276.64Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]
CATA2_RICCO4.848e-6277.21Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA_IPOBA1.080e-6173.53Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA1_RICCO1.842e-6175.74Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA2_CUCPE1.560e-6073.72Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16668 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908540 ID=DR908540; Name=DR908540; organism=Citrus sinensis; type=EST; length=620bp
TGGACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATC
GCAACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAG
GTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATA
TCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTG
AGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCC
CCAGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGA
CCCACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTC
AGGCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGG
CCAAGCATTTGAAGGTGTCACTTGAACTGGAACACTGGATGCTTTTGACT
TGCCAAGAGTAAGCAAGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAA
TTTCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTTG
CATGTTATGTGACTCTTTTCCTGTTGTTTCAATTAATAAAAGTCTGTTTT
ATGAAGTTCAAAAAAAAAAA
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