DR908540

Overview
NameDR908540
Unique NameDR908540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.108e-57
Identity = 99/136 (72.79%), Postives = 115/136 (84.56%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC H NNH+DGFMNFMHRDEEV+YFPSR+DP RHAE+ PIP  V+T  REK  I+KENNFKQ GERYRS+ P RQ+RF+ RW+ AL  PRVTHE R+IW+SYWSQ D +LGQKL SRLN++PS+
Sbjct:  357 GPNYLMLPVNAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.595e-57
Identity = 99/136 (72.79%), Postives = 116/136 (85.29%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC H NNH+DG MNF+HRDEEV+YFPSR DPTRHAE+ P+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  357 GPNYLMLPVNAPKCAHHNNHHDGLMNFIHRDEEVNYFPSRVDPTRHAEKDPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.595e-57
Identity = 98/136 (72.06%), Postives = 116/136 (85.29%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC + NNH+DG MNFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  357 GPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.856e-56
Identity = 95/136 (69.85%), Postives = 113/136 (83.09%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDY PSR+DP R AE+YPIPS V+ GRR    I KENNFKQ GERYRSW PDRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  357 GPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.849e-54
Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDYFPSR+DP R AE+YPIP+ V+ GRR    I KENN KQ GERYRSW  DRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  357 GPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.289e-54
Identity = 92/136 (67.65%), Postives = 111/136 (81.62%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNY+ LPVNAPKC H NNH DG MN  HRDEEVDY PSR+DP R AE+YPIP+ V+ GRR    I KENNFKQ GERYRSW  DRQ+R++ +W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  357 GPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52
Identity = 93/136 (68.38%), Postives = 110/136 (80.88%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC H NNHYDG MNFMHRDEEVDY+PSR+ P RHA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  357 GPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52
Identity = 93/136 (68.38%), Postives = 110/136 (80.88%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC H NNHYDG MNFMHRDEEVDY+PSR+ P RHA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  357 GPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.120e-50
Identity = 89/138 (64.49%), Postives = 113/138 (81.88%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC  +NNHYDG MNFMHRDEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+ R+  AL  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  357 GPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of DR908540 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 86/138 (62.32%), Postives = 110/138 (79.71%), Query Frame = 2
Query:    2 GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 409
            GPNYLMLPVNAPKC  + NHYDG MNFMHRDEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+    + L  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  356 GPNYLMLPVNAPKCGFKKNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFV-ALRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of DR908540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CATA1_MAIZE2.108e-5772.79Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA2_WHEAT3.595e-5772.79Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA2_ORYSJ3.595e-5772.06Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA1_SOLLC8.856e-5669.85Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA1_SOLTU2.849e-5468.38Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA2_SOLTU8.289e-5467.65Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_ORYSJ3.482e-5268.38Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI3.482e-5268.38Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU1.120e-5064.49Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE3.373e-4762.32Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16668 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908540 ID=DR908540; Name=DR908540; organism=Citrus sinensis; type=EST; length=620bp
TGGACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATC
GCAACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAG
GTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATA
TCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTG
AGAAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCC
CCAGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGA
CCCACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTC
AGGCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGG
CCAAGCATTTGAAGGTGTCACTTGAACTGGAACACTGGATGCTTTTGACT
TGCCAAGAGTAAGCAAGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAA
TTTCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTTG
CATGTTATGTGACTCTTTTCCTGTTGTTTCAATTAATAAAAGTCTGTTTT
ATGAAGTTCAAAAAAAAAAA
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