DR908518

Overview
NameDR908518
Unique NameDR908518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLV-PRAAREDCNVA-GYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI----GKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 431
            +VKET+R HP  P L   R A  D  +A G  +P GT  +V++WAI     +W  P  F PERFI    G  +DV+G D  L PFGAGRR+CPG +LGL  +   +A L+H F W LP    +  ++++E+  LS   K PL   A PR
Sbjct:  404 VVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPD--GSPPVSLDEVLKLSLEMKTPLAAAATPR 550          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 62/150 (41.33%), Postives = 90/150 (60.00%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLV-PRAAREDCNVA-GYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI----GKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL 434
            +VKE +R+HP  P L   R + ED N+  G  +P GT  +V++W+I   P++WE P EF PERF+    G+ +DV+G+D  L PFGAGRR+CPG +LGL  +   +A LLH F W LP   +   +++ E+  LS     PL  +   R+
Sbjct:  400 VVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEW-LP--HAEHPVDLSEVLKLSCEMARPLHCVPVTRV 546          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.170e-25
Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = 3
Query:    6 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKS--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW-KLPG-NMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 443
            VKE  RLHPVAPF +P  +  D  V GY IPKG+ VL+S   IGR+PS+W+KP++F PER +  +  +D+   D  ++ F AGRR C G  +G  +    LA L+ GF W  +PG N  +   +  ++F        PL  +A PRL+PH
Sbjct:  381 VKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFMAK-----PLYAVATPRLAPH 525          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.067e-24
Identity = 64/151 (42.38%), Postives = 86/151 (56.95%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLV-PRAARED---CNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI----GKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 431
            +VKET+R HP  P L   R A  D   CN  G  +P GT  +V++WAI    ++W  P+ F PERF+    G  +DV+G D  L PFGAGRR+CPG +LGL  +   +A L+H F W LP   +   + ++E+  LS   K PL   A PR
Sbjct:  399 VVKETLRAHPPGPLLSWARLATADVPLCN--GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAA--AVCLDEVLKLSLEMKTPLVAAAIPR 545          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.377e-24
Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI---GKS---IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG------NMSNEELNMEEIFGLSTPRKFPLEVLAHPRLS 437
            I+KET RLHP  P +  R   E C V  Y IP+ + + V+VW+IGR+P  W+ P EF PERF+   G S   +DV+G  F+LLPFG+GRRMCPG SL ++ + A L  ++  F + + G         +  +N++E  GL+ PR   L  +   R S
Sbjct:  358 ILKETFRLHPPVPMVTRRCVAE-CTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVGPKGEILKGDDIVINVDERPGLTAPRAHNLVCVPVDRTS 513          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 9.033e-24
Identity = 53/143 (37.06%), Postives = 85/143 (59.44%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 431
            ++ ET+RL+  AP L+P +  ++CN+ GY +P+ T VL++ WAI R P LW +   F PERF     + KG   +L+ FG GRR CPG  L ++ I  +LA L+  F WKL   ++ +++++ E  G +  +  PL+ +   R
Sbjct:  356 VINETLRLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKL---INGDKIDLAERDGFTLTKLVPLKAMCKSR 490          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.541e-23
Identity = 60/148 (40.54%), Postives = 84/148 (56.76%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLV-PRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSID----VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 431
            +VKE +RLHP  P L   R +  D  + GY +P GT  +V+ WAI R P +W+ P EF PERF+    D    + G D  L PFG+GRR CPG +LG   +   +A+LLH F W +P +   + +++ E+  LS+    PL V   PR
Sbjct:  377 VVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW-VPSD--EKGVDLTEVLKLSSEMANPLTVKVRPR 521          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.541e-23
Identity = 56/140 (40.00%), Postives = 84/140 (60.00%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWE-KPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLP-GNMSNEELNMEEIFGLSTPRKFPLEV 416
            ++KE +RLHP  P L  R   ED  + GYDI  GT V+++ WA+ R+P++W    NE+ PER        +  D + +PFGAGRR+CPG    L + + +LANL+  F W+L  G + +++ ++ E  G+   RKFPL V
Sbjct:  353 VIKEGLRLHPSGPLLF-RLPSEDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIV 491          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGK--SIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 443
            I++E  RLHPVA F +P  A  D  VAGY IPKG++VL+S + +GR+P +W  P  F PER + +   + +  +D   + F  G+R C   +LG  +    LA LL GF WKLP N +  EL ME    +   +  PL ++   RL  H
Sbjct:  391 ILREAFRLHPVAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVEL-MESSHDMFLAK--PLVMVGELRLPEH 536          
BLAST of DR908518 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 9.987e-23
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 3
Query:    3 IVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKS--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 425
            ++KET+RL    P LVP     D  + G+DIP  +++LV+ W +  +P+LW+KP EF PERF+ +   ++  G+DF  LPFG GRR CPG  L L ++  ++  L+  F    P   S  +++  E  G     +F L +L H
Sbjct:  360 VIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQS--KIDTSEKGG-----QFSLHILKH 495          
The following BLAST results are available for this feature:
BLAST of DR908518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 322
Match NameE-valueIdentityDescription
C78AB_ORYSJ1.260e-2542.95Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C78A4_PINRA1.260e-2541.33Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C79A2_ARATH8.170e-2542.00Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C78A1_MAIZE1.067e-2442.38Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C93B1_GLYEC2.377e-2440.76Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C81E1_GLYEC9.033e-2437.06Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C78A3_SOYBN1.541e-2340.54Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71AR_ARATH1.541e-2340.00Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C79B1_SINAL7.647e-2339.60Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
TCMO_PEA9.987e-2337.06Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16646 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-40_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908518 ID=DR908518; Name=DR908518; organism=Citrus sinensis; type=EST; length=624bp
CCATAGTTAAAGAAACAATGCGTTTGCACCCTGTGGCTCCTTTCCTAGTG
CCCCGAGCGGCTAGAGAAGATTGCAACGTAGCCGGCTACGACATCCCAAA
AGGCACTCGAGTCCTTGTTAGTGTATGGGCGATTGGGAGACACCCAAGTT
TGTGGGAAAAGCCAAATGAATTTTATCCTGAGAGATTTATTGGAAAATCA
ATTGATGTGAAAGGCCATGATTTTGAGCTGCTGCCATTTGGGGCTGGGAG
AAGAATGTGTCCAGGGTACAGTCTCGGCCTTAAGGTTATTCAAGCAAGCT
TAGCTAATCTTTTGCATGGATTTGCATGGAAATTGCCAGGAAATATGAGC
AACGAGGAGCTGAATATGGAGGAAATTTTTGGGCTTTCTACCCCGAGAAA
GTTTCCACTTGAGGTTCTGGCTCACCCAAGGCTTTCGCCCCATCTTTACA
ATCTGTGATTGTGGCTTCCAAAATAATTAATTACGGCGTAGCGTACTTTT
GAGTAAGTGGTTTGTTAGTGCGAAAAGGCCATGGATTTGCAGATGTAATG
AGATTTTAAACCCAAACTAACGTGCGCTGCTGTTTGGGCCCAAATAACGT
GTCATCTTTTGATATAAAAAAAAA
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