DR908471

Overview
NameDR908471
Unique NameDR908471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_HUMAN (Citrate synthase, mitochondrial OS=Homo sapiens GN=CS PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 1.272e-81
Identity = 121/166 (72.89%), Postives = 148/166 (89.16%), Query Frame = 1 
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            EL RLY+TIHSDHEGGNVSAHT HLV SALSDPYLSFAAA+NGLAGPLHGLANQEVL+W+  +  E G++V+ E+L+DY+W TLNSG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  253 ELTRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 418

HSP 2 Score: 53.9138 bits (128), Expect = 1.272e-81
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QLIW RALG PLE  K
Sbjct:  419 YYTVLFGVSRALGVLAQLIWSRALGFPLERPK 450
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_XIPGL (Citrate synthase, mitochondrial OS=Xiphias gladius GN=cs PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 2.164e-81
Identity = 120/170 (70.59%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            P+  ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  252 PQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTALQKELGGEVSDERMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 421

HSP 2 Score: 53.5286 bits (127), Expect = 2.164e-81
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QL+W RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLAQLVWSRALGFPLERPK 453
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_DANRE (Citrate synthase, mitochondrial OS=Danio rerio GN=cs PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 2.164e-81
Identity = 120/170 (70.59%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            P+  ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  251 PQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTALQKELGGEVSDEKMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 420

HSP 2 Score: 53.5286 bits (127), Expect = 2.164e-81
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QL+W RALG PLE  K
Sbjct:  421 YYTVLFGVSRALGVLAQLVWSRALGFPLERPK 452
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_TETAD (Citrate synthase, mitochondrial OS=Tetrapturus audax GN=cs PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 4.802e-81
Identity = 119/170 (70.00%), Postives = 149/170 (87.65%), Query Frame = 1 
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            P+  ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + G+ KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  252 PQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTALQKELGGEVSDERMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGRAKNPWPNVDAHSGVLLQYYGMTEMN 421

HSP 2 Score: 53.5286 bits (127), Expect = 4.802e-81
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QL+W RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLAQLVWSRALGFPLERPK 453
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_THUOB (Citrate synthase, mitochondrial OS=Thunnus obesus GN=cs PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.390e-80
Identity = 119/166 (71.69%), Postives = 147/166 (88.55%), Query Frame = 1 
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  256 ELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTALQKEMGGEVSDERMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 421

HSP 2 Score: 53.5286 bits (127), Expect = 1.390e-80
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QL+W RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLAQLVWSRALGFPLERPK 453
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_THUAL (Citrate synthase, mitochondrial OS=Thunnus albacares GN=cs PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.390e-80
Identity = 119/166 (71.69%), Postives = 147/166 (88.55%), Query Frame = 1 
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  256 ELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTALQKEMGGEVSDERMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 421

HSP 2 Score: 53.5286 bits (127), Expect = 1.390e-80
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QL+W RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLAQLVWSRALGFPLERPK 453
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_KATPE (Citrate synthase, mitochondrial OS=Katsuwonus pelamis GN=cs PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.390e-80
Identity = 119/166 (71.69%), Postives = 147/166 (88.55%), Query Frame = 1 
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYLSF+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRYTCQREFALKHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  256 ELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMNGLAGPLHGLANQEVLVWLTALQKEMGGEVSDERMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 421

HSP 2 Score: 53.5286 bits (127), Expect = 1.390e-80
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ +QL+W RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLAQLVWSRALGFPLERPK 453
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_TETNG (Citrate synthase, mitochondrial OS=Tetraodon nigroviridis GN=cs PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 5.247e-80
Identity = 116/166 (69.88%), Postives = 147/166 (88.55%), Query Frame = 1 
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD 510
            ELMRLY+TIHSDHEGGNVSAHT HLV SALSDPYL+F+AA+NGLAGPLHGLANQEVL+W+ ++  E G  V+ E+++DY+W TL SG+VVPG+GH VLRKTDPRY+CQREFA+KHLP+DP+F+LV++L+++VP +L + GK KNPWPNVDAHSGVLL ++G+ E +
Sbjct:  256 ELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLAFSAAMNGLAGPLHGLANQEVLVWLTALQKELGGEVSDEKMRDYIWNTLKSGRVVPGYGHAVLRKTDPRYSCQREFAMKHLPNDPMFKLVAQLYKIVPDVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMN 421

HSP 2 Score: 54.6842 bits (130), Expect = 5.247e-80
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTVLFGVSR+LG+ SQL+W RALG PLE  K
Sbjct:  422 YYTVLFGVSRALGVLSQLVWSRALGFPLERPK 453
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_CAEEL (Probable citrate synthase, mitochondrial OS=Caenorhabditis elegans GN=cts-1 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 6.841e-77
Identity = 121/168 (72.02%), Postives = 141/168 (83.93%), Query Frame = 1 
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            P   ELMRLY+ IHSDHEGGNVSAHT HLV SALSDPYLSF+AA+ GLAGPLHGLANQEVL+++  +V E G N T EQLK++VWK L SG+VVPG+GH VLRKTDPRY CQREFALKHLP+D LF+LVS L+++ P IL + GK KNPWPNVD+HSGVLL +FG+ E
Sbjct:  251 PLFAELMRLYLVIHSDHEGGNVSAHTSHLVGSALSDPYLSFSAAMAGLAGPLHGLANQEVLVFLNKIVGEIGFNYTEEQLKEWVWKHLKSGQVVPGYGHAVLRKTDPRYECQREFALKHLPNDDLFKLVSTLYKITPGILLEQGKAKNPWPNVDSHSGVLLQYFGMTE 418

HSP 2 Score: 50.447 bits (119), Expect = 6.841e-77
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            +YTVLFGVSR+LG  SQLIW R +GLPLE  K
Sbjct:  421 FYTVLFGVSRALGCLSQLIWARGMGLPLERPK 452
[Close]
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_CAEBR (Probable citrate synthase, mitochondrial OS=Caenorhabditis briggsae GN=cts-1 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.518e-76
Identity = 120/168 (71.43%), Postives = 141/168 (83.93%), Query Frame = 1 
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            P   ELMRLY+ IHSDHEGGNVSAHT HLV SALSDPYL+F+AA+ GLAGPLHGLANQEVL+++  +V E G N T EQLK++VWK L SG+VVPG+GH VLRKTDPRY CQREFALKHLP+D LF+LVS L+++ P IL + GK KNPWPNVD+HSGVLL +FG+ E
Sbjct:  251 PLFAELMRLYLVIHSDHEGGNVSAHTSHLVGSALSDPYLAFSAAMAGLAGPLHGLANQEVLVFLNKIVGEIGFNYTEEQLKEWVWKHLKSGQVVPGYGHAVLRKTDPRYECQREFALKHLPNDDLFKLVSTLYKITPGILLEQGKAKNPWPNVDSHSGVLLQYFGMTE 418

HSP 2 Score: 50.447 bits (119), Expect = 1.518e-76
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 3 
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            +YTVLFGVSR+LG  SQLIW R +GLPLE  K
Sbjct:  421 FYTVLFGVSRALGCLSQLIWARGMGLPLERPK 452
The following BLAST results are available for this feature:
BLAST of DR908471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CISY_HUMAN1.272e-8172.89Citrate synthase, mitochondrial OS=Homo sapiens GN... [more]
CISY_XIPGL2.164e-8170.59Citrate synthase, mitochondrial OS=Xiphias gladius... [more]
CISY_DANRE2.164e-8170.59Citrate synthase, mitochondrial OS=Danio rerio GN=... [more]
CISY_TETAD4.802e-8170.00Citrate synthase, mitochondrial OS=Tetrapturus aud... [more]
CISY_THUOB1.390e-8071.69Citrate synthase, mitochondrial OS=Thunnus obesus ... [more]
CISY_THUAL1.390e-8071.69Citrate synthase, mitochondrial OS=Thunnus albacar... [more]
CISY_KATPE1.390e-8071.69Citrate synthase, mitochondrial OS=Katsuwonus pela... [more]
CISY_TETNG5.247e-8069.88Citrate synthase, mitochondrial OS=Tetraodon nigro... [more]
CISY_CAEEL6.841e-7772.02Probable citrate synthase, mitochondrial OS=Caenor... [more]
CISY_CAEBR1.518e-7671.43Probable citrate synthase, mitochondrial OS=Caenor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16599 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908471 ID=DR908471; Name=DR908471; organism=Citrus sinensis; type=EST; length=634bp
CCTAAGATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACCA
CGAAGGTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCAC
TTTCAGATCCTTATCTTTCTTTTGCTGCCGCATTAAATGGTTTAGCTGGA
CCACTCCATGGTTTGGCTAATCAGGAAGTTTTGCTTTGGATCAAATCTGT
GGTGGATGAGTGTGGTGAGAACGTAACAACGGAGCAGTTGAAAGATTATG
TCTGGAAAACATTGAATAGTGGCAAGGTTGTCCCTGGATTTGGTCATGGT
GTTTTGCGTAAAACTGATCCGAGATACACTTGTCAGAGGGAGTTTGCCTT
GAAGCATTTGCCTGATGATCCATTGTTCCAGCTGGTTTCTAAGCTGTTTG
AAGTGGTGCCCCCAATATTAACAAAACTAGGCAAGGTTAAAAACCCCTGG
CCAAATGTTGATGCTCACAGTGGGGTGCTGCTGAACCATTTTGGTTTGGC
TGAGCAAGATATTATACTGTTCTTTTTGGAGTATCAAGGAGTCTTGGAAT
CTGCTCTCAGTTGATATGGGACCGAGCTCTTGGGCTGCCACTTGAGAGCC
AAAAGTGTAACTTTAGATTGGATTGAGAAAATTG
back to top