DR908471

Overview
NameDR908471
Unique NameDR908471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_ASPNG (Citrate synthase, mitochondrial OS=Aspergillus niger GN=cit-1 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 3.667e-72
Identity = 112/165 (67.88%), Postives = 138/165 (83.64%), Query Frame = 1
Query:   10 LELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            +ELMRLY+TIHSDHEGGNVSAHT HLV SALS P LS AA LNGLAGPLHGLANQEVL W+  +    G +++ E +K+Y+W TLN+G+VVPG+GH VLRKTDPRY  QREFAL+ LPDDP+F+LVS+++++ P +LT+ GK KNP+PNVDAHSGVLL ++GL E
Sbjct:  261 VELMRLYLTIHSDHEGGNVSAHTTHLVGSALSSPMLSLAAGLNGLAGPLHGLANQEVLNWLTKMKAAIGNDLSDEAIKNYLWSTLNAGQVVPGYGHAVLRKTDPRYVSQREFALRKLPDDPMFKLVSQVYKIAPGVLTEHGKTKNPYPNVDAHSGVLLQYYGLTE 425          

HSP 2 Score: 50.447 bits (119), Expect = 3.667e-72
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 3
Query:  504 ARYYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            A YYTVLFGVSR+LG+  QLI DRALG P+E  K
Sbjct:  426 ANYYTVLFGVSRALGVLPQLIIDRALGAPIERPK 459          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_RAT (Citrate synthase, mitochondrial OS=Rattus norvegicus GN=Cs PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.167e-72
Identity = 130/211 (61.61%), Postives = 162/211 (76.78%), Query Frame = 1
Query:    1 PKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIEK 630
            P+  ELMRLY+TIHSDH+GGNVSAHT HLV SALSD YLSFAAA+NGLAGPLHGLANQEVL+W+  +  E G++V+ E+L+DY+W TLNSG+VVPG+GH VLRKTDPRY+CQREFALKHLP DP+F+LV++L+++VP IL + GK KNPWPNVDAHSGVLL ++G+ E +           L        +  LG  L R KS++ D + K
Sbjct:  249 PQFTELMRLYLTIHSDHDGGNVSAHTSHLVGSALSDTYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYSCQREFALKHLPKDPMFKLVAQLYKIVPNILLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTDGLMK 459          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_NEUCR (Citrate synthase, mitochondrial OS=Neurospora crassa GN=cit-1 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.353e-71
Identity = 109/165 (66.06%), Postives = 139/165 (84.24%), Query Frame = 1
Query:   10 LELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            +EL+RLY+TIH+DHEGGNVSAHT HLV SALS P+LS AA LNGLAGPLHGLANQEVL W+  +    G++++ E +  Y+W TLN+G+VVPG+GH VLRKTDPRY+ QR+FA +HLP+DP+FQLVS+++++ P +LT+ GK KNP+PNVDAHSGVLL H+GL E
Sbjct:  257 VELLRLYLTIHTDHEGGNVSAHTTHLVGSALSSPFLSVAAGLNGLAGPLHGLANQEVLNWLTEMKKVIGDDLSDEAITKYLWDTLNAGRVVPGYGHAVLRKTDPRYSAQRKFAQEHLPEDPMFQLVSQVYKIAPKVLTEHGKTKNPYPNVDAHSGVLLQHYGLTE 421          

HSP 2 Score: 48.521 bits (114), Expect = 2.353e-71
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 3
Query:  504 ARYYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            A YYTVLFGVSR++G+  QLI DRA+G P+E  K
Sbjct:  422 ANYYTVLFGVSRAIGVLPQLIIDRAVGAPIERPK 455          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY1_YEAST (Citrate synthase, mitochondrial OS=Saccharomyces cerevisiae GN=CIT1 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 6.806e-71
Identity = 114/165 (69.09%), Postives = 135/165 (81.82%), Query Frame = 1
Query:   10 LELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            ++LMRLY+TIHSDHEGGNVSAHT HLV SALS PYLS AA LNGLAGPLHG ANQEVL W+  + +E   + + E ++ Y+W TLN+G+VVPG+GH VLRKTDPRYT QREFALKH PD  LF+LVS ++EV P +LTK GK KNPWPNVD+HSGVLL ++GL E
Sbjct:  263 IDLMRLYLTIHSDHEGGNVSAHTTHLVGSALSSPYLSLAAGLNGLAGPLHGRANQEVLEWLFKLREEVKGDYSKETIEKYLWDTLNAGRVVPGYGHAVLRKTDPRYTAQREFALKHFPDYELFKLVSTIYEVAPGVLTKHGKTKNPWPNVDSHSGVLLQYYGLTE 427          

HSP 2 Score: 45.4394 bits (106), Expect = 6.806e-71
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 3
Query:  504 ARYYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            A +YTVLFGV+R++G+  QLI DRA+G P+E  K
Sbjct:  428 ASFYTVLFGVARAIGVLPQLIIDRAVGAPIERPK 461          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY2_YEAST (Citrate synthase, peroxisomal OS=Saccharomyces cerevisiae GN=CIT2 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.057e-68
Identity = 108/165 (65.45%), Postives = 135/165 (81.82%), Query Frame = 1
Query:   10 LELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            ++LMRLY+TIHSDHEGGNVSAHT HLV SALS PYLS A+ LNGLAGPLHG ANQEVL W+ ++ +E  ++ + + ++ Y+W TLNSG+V+PG+GH VLRKTDPRY  QR+FA+ H PD  LF+LVS ++EV P +LT+ GK KNPWPNVDAHSGVLL ++GL E
Sbjct:  244 VDLMRLYLTIHSDHEGGNVSAHTSHLVGSALSSPYLSLASGLNGLAGPLHGRANQEVLEWLFALKEEVNDDYSKDTIEKYLWDTLNSGRVIPGYGHAVLRKTDPRYMAQRKFAMDHFPDYELFKLVSSIYEVAPGVLTEHGKTKNPWPNVDAHSGVLLQYYGLKE 408          

HSP 2 Score: 43.5134 bits (101), Expect = 1.057e-68
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            +YTVLFGVSR+ GI +QLI DRA+G  +E  K
Sbjct:  411 FYTVLFGVSRAFGILAQLITDRAIGASIERPK 442          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_CANTR (Citrate synthase, mitochondrial OS=Candida tropicalis GN=CIT PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 3.985e-68
Identity = 109/168 (64.88%), Postives = 133/168 (79.17%), Query Frame = 1
Query:    4 KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQ 507
            + LELMRLY+TIHSDHEGGNVSAHT HLV SALS P+LS AA LNGLAGPLHG ANQEVL W+  + +E   + + E ++ Y+W TLN+G+V PG+GH VLRKTDPRYT QREFALKH+PD  LF+LVS ++EV P +  + G  KNPWPNV +HSGVLL ++GL E+
Sbjct:  250 EFLELMRLYLTIHSDHEGGNVSAHTTHLVGSALSSPFLSLAAGLNGLAGPLHGRANQEVLEWLFKLREELNGDYSKEAIEKYLWDTLNAGRVGPGYGHAVLRKTDPRYTAQREFALKHMPDYELFKLVSNIYEVAPGVFDQHGMTKNPWPNVGSHSGVLLQYYGLTEE 417          

HSP 2 Score: 45.8246 bits (107), Expect = 3.985e-68
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            +YTVLFGVSR+ G+  QLI DR LG+P+E  K
Sbjct:  419 FYTVLFGVSRAFGVLPQLILDRGLGMPIERPK 450          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_SCHPO (Probable citrate synthase, mitochondrial OS=Schizosaccharomyces pombe GN=cit1 PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 6.227e-68
Identity = 126/211 (59.72%), Postives = 161/211 (76.30%), Query Frame = 1
Query:    4 KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDIILFFLEYQGVLESALS*YGTELLGCHL-RAKSVTLDWIEKI 633
            + +ELMRLY+TIH+DHEGGNVSAHTGHLV SALS P+LS AA+LNGLAGPLHGLANQEVL ++ ++  E G++++ E +K Y+WK LNSG+VVPG+GH VLRKTDPRYT QREFAL+HLP DP+FQLVS+L+E+VP +LT+ GK KNP+PNVD+HSGVLL ++GL EQ            L  A        LG  + R KS + + ++K+
Sbjct:  259 EFVELMRLYLTIHADHEGGNVSAHTGHLVGSALSSPFLSMAASLNGLAGPLHGLANQEVLNFLITMKKEIGDDLSEETIKSYLWKLLNSGRVVPGYGHAVLRKTDPRYTAQREFALEHLPKDPMFQLVSRLYEIVPGVLTEHGKTKNPYPNVDSHSGVLLQYYGLKEQSFYTVLFGVSRTLGVASQLIWDRALGLPIERPKSFSTEALKKM 469          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISYM_DICDI (Citrate synthase, mitochondrial OS=Dictyostelium discoideum GN=cs PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.534e-66
Identity = 132/209 (63.16%), Postives = 160/209 (76.56%), Query Frame = 1
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECG-ENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQDI--ILFFLEYQ-GVLESALS*YGTELLGCHL-RAKSVTLDWI 624
            ELMRLY+TIH+DHEGGNVSAHT HLV SALSD YLS +A + GLAGPLHGLANQEVL W   + ++ G + V+ E L + +W+ LN+G+VVPGFGH VLRKTDPRYTCQREFALKHLP DPLF+LVS+++EVVP ILTK GK KNP+PNVDAHSG LL ++GL E +   +LF +    GVL S +      +LG  + R KSVT +WI
Sbjct:  244 ELMRLYLTIHTDHEGGNVSAHTTHLVGSALSDSYLSLSAGMCGLAGPLHGLANQEVLSWTMKLQEKLGNKEVSNEVLSEAIWEGLNAGRVVPGFGHAVLRKTDPRYTCQREFALKHLPQDPLFKLVSQIYEVVPDILTKHGKTKNPYPNVDAHSGCLLQYYGLKEHNFYTVLFGVSRAIGVLSSLV---WDRILGHPIERPKSVTTEWI 449          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: PRPC_EMENI (2-methylcitrate synthase, mitochondrial OS=Emericella nidulans GN=mcsA PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.986e-59
Identity = 96/166 (57.83%), Postives = 122/166 (73.49%), Query Frame = 1
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFAL--KHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAE 504
            +L+RLY+ +H DHEGGNVSAH  HLV SALSDP+LS++A L GLAGPLHGLA QEVL WI ++ ++ G   T E ++ Y+W TL SG+VVPG+GHGVLRK DPR+    +FA   K +  +P+FQLV K  E+ P +LT+ GK KNP PNVDA SGVL  H+G  +
Sbjct:  252 DLLRLYLALHGDHEGGNVSAHATHLVGSALSDPFLSYSAGLLGLAGPLHGLAAQEVLRWILAMQEKIGTKFTDEDVRAYLWDTLKSGRVVPGYGHGVLRKPDPRFQALMDFAATRKDVLANPVFQLVKKNSEIAPGVLTEHGKTKNPHPNVDAASGVLFYHYGFQQ 417          

HSP 2 Score: 51.6026 bits (122), Expect = 2.986e-59
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 3
Query:  510 YYTVLFGVSRSLGICSQLIWDRALGLPLESQK 605
            YYTV FGVSR+LG   QLIWDRALGLP+E  K
Sbjct:  420 YYTVTFGVSRALGPLVQLIWDRALGLPIERPK 451          
BLAST of DR908471 vs. ExPASy Swiss-Prot
Match: CISY_LEIBR (Probable citrate synthase, mitochondrial OS=Leishmania braziliensis GN=LbrM18_V2.0760 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.013e-59
Identity = 123/218 (56.42%), Postives = 152/218 (69.72%), Query Frame = 1
Query:   13 ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDE--------CGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEQD--IILFFLEYQ-GVLESALS*YGTELLGCHL-RAKSVTLDWIEK 630
            E MRLY++IH DHEGGNVSAHT  LVASALSDPYL+F+A LNGLAGPLHGLANQEVL ++ S+ D         C E      L  Y W+ LNSG+VVPG+GH VLRK DPRYTC R F L+H  +D LF+L++ +++++P ILT+ GK KNP+PNVDAHSGVLL H+GL EQD   +LF L  Q GV+   +      L G  L R KS+T + + K
Sbjct:  249 ECMRLYLSIHVDHEGGNVSAHTTTLVASALSDPYLAFSAGLNGLAGPLHGLANQEVLKYLLSMQDRVKADGVNVCDEAALEVALTKYTWELLNSGQVVPGYGHAVLRKVDPRYTCLRNFCLRHHFEDDLFKLINIIYKIMPGILTEHGKTKNPYPNVDAHSGVLLQHYGLTEQDYYTVLFGLSRQMGVMAGVV---WDRLQGRPLERPKSITTEMLAK 463          
The following BLAST results are available for this feature:
BLAST of DR908471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CISY_ASPNG3.667e-7267.88Citrate synthase, mitochondrial OS=Aspergillus nig... [more]
CISY_RAT4.167e-7261.61Citrate synthase, mitochondrial OS=Rattus norvegic... [more]
CISY_NEUCR2.353e-7166.06Citrate synthase, mitochondrial OS=Neurospora cras... [more]
CISY1_YEAST6.806e-7169.09Citrate synthase, mitochondrial OS=Saccharomyces c... [more]
CISY2_YEAST1.057e-6865.45Citrate synthase, peroxisomal OS=Saccharomyces cer... [more]
CISY_CANTR3.985e-6864.88Citrate synthase, mitochondrial OS=Candida tropica... [more]
CISY_SCHPO6.227e-6859.72Probable citrate synthase, mitochondrial OS=Schizo... [more]
CISYM_DICDI1.534e-6663.16Citrate synthase, mitochondrial OS=Dictyostelium d... [more]
PRPC_EMENI2.986e-5957.832-methylcitrate synthase, mitochondrial OS=Emerice... [more]
CISY_LEIBR9.013e-5956.42Probable citrate synthase, mitochondrial OS=Leishm... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16599 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908471 ID=DR908471; Name=DR908471; organism=Citrus sinensis; type=EST; length=634bp
CCTAAGATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACCA
CGAAGGTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCAC
TTTCAGATCCTTATCTTTCTTTTGCTGCCGCATTAAATGGTTTAGCTGGA
CCACTCCATGGTTTGGCTAATCAGGAAGTTTTGCTTTGGATCAAATCTGT
GGTGGATGAGTGTGGTGAGAACGTAACAACGGAGCAGTTGAAAGATTATG
TCTGGAAAACATTGAATAGTGGCAAGGTTGTCCCTGGATTTGGTCATGGT
GTTTTGCGTAAAACTGATCCGAGATACACTTGTCAGAGGGAGTTTGCCTT
GAAGCATTTGCCTGATGATCCATTGTTCCAGCTGGTTTCTAAGCTGTTTG
AAGTGGTGCCCCCAATATTAACAAAACTAGGCAAGGTTAAAAACCCCTGG
CCAAATGTTGATGCTCACAGTGGGGTGCTGCTGAACCATTTTGGTTTGGC
TGAGCAAGATATTATACTGTTCTTTTTGGAGTATCAAGGAGTCTTGGAAT
CTGCTCTCAGTTGATATGGGACCGAGCTCTTGGGCTGCCACTTGAGAGCC
AAAAGTGTAACTTTAGATTGGATTGAGAAAATTG
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