DR908468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.750e-17 Identity = 57/156 (36.54%), Postives = 81/156 (51.92%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQM-SPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEL 493 I E+ + V+ S+ P F AGAD+ S E + + ++AL +P +A I C RIC + A +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ K A+ +GLV+ VP A+EL Sbjct: 46 IRENKALRGVVFISAKPDNFIAGADINMIGNCKSAQEAETLARQGQQIMAEIQALSVPVVAAIHGACLGGGLEMALACHRRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQALRVGLVDEVVPHAILLEAAVEL 201
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_KLEP7 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.750e-17 Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEG 514 L HA + + + S +++RS F GAD+ E + ++ +++ S F+ LE LP+PTI+ ++ D R+ +GLPET L I+PG GG+ RLPRL+G A +II G+ V A+ +GLV+ V A + + AL +LR G Sbjct: 39 LGHALDVLEKQSDLKGLLLRSE-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQALKIGLVDGVVAAEKLRDGALAILRQAMNG 207
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.750e-17 Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 2 Query: 14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEL 493 + A + ED ++I S K F AGAD+KE +++ + Y N L + + L + P IA ++ CD+ I GE A+ G PE L IPG GGTQRL R +GKS A +++ TG ++ +A GLV+ VP + +A ++ Sbjct: 56 INSAVKLFQEDKDVGSIIITGS-EKAFAAGADIKEMEKVTLPDA--YNNDLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKM 212
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_PSYA2 (Fatty acid oxidation complex subunit alpha OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=fadB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.204e-17 Identity = 54/153 (35.29%), Postives = 78/153 (50.98%), Query Frame = 2 Query: 65 MIRSSVPKVFCAGADLKE---RRQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEG 514 +I +S VF AGAD+ E + S EI +V + F+ E LP P +A I+ C+ R+ + A++GLPET L I PG GGT R R++G A ++I TG DA+ LGLV+ V A Q A++L++ G Sbjct: 56 LIVTSSKGVFIAGADITEFVASFKQSEEEIKDWVININDAFNRFEDLPFPKVAAINGAALGGGCEMTLVCEYRVMSDKAIIGLPETQLGIFPGFGGTVRSTRVIGIDNALELIATGAPKKALDALKLGLVDATVAADDLQDAAIDLVKKCISG 208
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_VIBF1 (Fatty acid oxidation complex subunit alpha OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadJ PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 41 EDSSANV--VMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 E+ A++ ++I+S P F AGAD+ + SE + F +E LP T+A I CD R+C + LGLPE L ++PG+GGTQRLPRL+G + DII TG+++ K A+ LG+V+ VP Sbjct: 47 EEQQAHIKGLVIQSGKPDNFIAGADINMIANCQNASEAQALAEKGQHLFQRIEDLPFATVAAIHGPCLGGGLELALACDYRVCSDDNKTKLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDIILTGKQLRPKTALKLGVVDASVP 191
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517 + E+ V+ S+ P F AGAD+ + E + + + ALPIP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+EL + S Sbjct: 46 LRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSS 209
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadJ PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517 + E+ V+ S+ P F AGAD+ + E + + + ALPIP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+EL + S Sbjct: 46 LRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSS 209
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHIF8 (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri serotype 5b (strain 8401) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517 + E+ V+ S+ P F AGAD+ + E + + + ALPIP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+EL + S Sbjct: 46 LRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEINALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKDRPSS 209
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+K+ K A+ +GLVN VP Sbjct: 44 IKSDSSIRGLVLISGKKDSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQALKMGLVNDVVP 188
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_ECOL6 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O6 GN=fadJ PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517 + E+ V+ S+ P F AGAD+ + E + + + ALP+P IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A+ LGLV+ VP A+EL + S Sbjct: 46 LRENKDLRGVVFISAKPDNFIAGADINMIANCKTAQEAEALARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKQDRPSS 209 The following BLAST results are available for this feature:
BLAST of DR908468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908468 ID=DR908468; Name=DR908468; organism=Citrus sinensis; type=EST; length=620bpback to top |