DR908468

Overview
NameDR908468
Unique NameDR908468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSE (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SE11) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517
            + E+     V+  S+ P  F AGAD+        + E        +   + + ALPIP IA I              C  R+C +    +LGLPE  L ++PG+GGTQRLPRL+G S A ++I TG+++  K A+ LGLV+  VP       A+EL +     S
Sbjct:   46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSS 209          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_ECO8A (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8 (strain IAI1) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517
            + E+     V+  S+ P  F AGAD+        + E        +   + + ALPIP IA I              C  R+C +    +LGLPE  L ++PG+GGTQRLPRL+G S A ++I TG+++  K A+ LGLV+  VP       A+EL +     S
Sbjct:   46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSS 209          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_ECO55 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain 55989 / EAEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517
            + E+     V+  S+ P  F AGAD+        + E        +   + + ALPIP IA I              C  R+C +    +LGLPE  L ++PG+GGTQRLPRL+G S A ++I TG+++  K A+ LGLV+  VP       A+EL +     S
Sbjct:   46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSS 209          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_ECO24 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517
            + E+     V+  S+ P  F AGAD+        + E        +   + + ALPIP IA I              C  R+C +    +LGLPE  L ++PG+GGTQRLPRL+G S A ++I TG+++  K A+ LGLV+  VP       A+EL +     S
Sbjct:   46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSS 209          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_SHEPA (Fatty acid oxidation complex subunit alpha OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 2
Query:   14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRN 502
            L  A ++I +DSS   +M+ SS    F  GAD+ E   +   E   +  ++      F+ LE LP PTI+ I+              D RI    A +GLPET L IIPG GGT RLPR++G   A + I +G+    + A+ +G ++  V   Q +  AL++L++
Sbjct:   39 LNAALDSIKQDSSIKALML-SSAKDAFVVGADITEFLGLFAEEDTVLQSWLEQANVVFNKLEDLPFPTISAINGFALGAGCETILATDFRIADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITSGKDQRPEAALKVGAIDAVVAPEQLKPAALKMLKD 203          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = 2
Query:   14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERR---QMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEG 514
            L HA + + + S    +++RS     F  GAD+ E     Q+   ++  +++   S F+ LE LP+PTI+ ++              D R+      +GLPET L I+PG GG+ R+PR++G   A +II  G+ V    A+ +GL++  V A + +  A+ +LR    G
Sbjct:   39 LGHALDVLEKQSDLKGLLLRSE-KAAFIVGADITEFLSLFQVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLIDGIVKAEKLRDGAISILRQAING 207          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: ECHM_PONAB (Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.147e-16
Identity = 50/149 (33.56%), Postives = 74/149 (49.66%), Query Frame = 2
Query:   14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460
            L  A +   ED +   +++     K F AGAD+KE + +S  +   Y +     +  L  +  P IA ++             CD+   GE A    PE  +  IPGAGGTQRL R VGKS+A +++ TG ++S +DA   GLV+   P
Sbjct:   69 LNQALKIFEEDPAVGAIVLTGG-DKAFAAGADIKEMQNLSFQDC--YSSKFLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVSKICP 214          

HSP 2 Score: 21.1718 bits (43), Expect = 1.147e-16
Identity = 10/32 (31.25%), Postives = 15/32 (46.88%), Query Frame = 3
Query:  501 INQKGPIAIRMAKRAITKGLEVDMASALELEK 596
            I     I   MAK ++    E+ +A   +LEK
Sbjct:  229 IASNSKIIAAMAKESVNAAFEMTLAEGSKLEK 260          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: PAAF_ECOLI (Probable enoyl-CoA hydratase paaF OS=Escherichia coli (strain K12) GN=paaF PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16
Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = 2
Query:    5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSEIHFYVNTLR-STFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEL 493
            L  L +  E  + D+S +V +I  +  + F AGADL E   M+  ++   +N  R   ++ L+A   P IA ++             CD+ + GE A  GLPE  L I+PGAGGTQRL R VGKS+A  ++ +G  ++ + A   GLV+   P+      AL+L
Sbjct:   31 LMQLVNELEAAATDTSISVCVITGNA-RFFAAGADLNE---MAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQL 190          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_YERE8 (Fatty acid oxidation complex subunit alpha OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadJ PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 2
Query:   62 VMIRSSVPKVFCAGADLKERRQM-SPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460
            ++I S  P  F AGAD+       +  +        +S  + + A P+P +A I              C  RIC +    +LGLPE  L ++PG+GGTQRLPRLVG S A D+I TGR+V  + A+ +GLV+  VP
Sbjct:   74 LVIISGKPDSFIAGADITMIAACHTAQDARILAQKGQSILAQIAAFPVPVVAAIHGACLGGGLELALACHSRICSQDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSKALDMILTGRQVRARQALKMGLVDDVVP 209          
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLU (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 2
Query:   35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEGS 517
            + E+     V+  S+ P  F AGAD+        + E        +   + + ALP+P IA I              C  R+C +    +LGLPE  L ++PG+GGTQRLPRL+G S A ++I TG+++  K A+ LGLV+  VP       A+EL +     S
Sbjct:   46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEAAVELAKQDRPSS 209          
The following BLAST results are available for this feature:
BLAST of DR908468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
FADJ_ECOSE1.058e-1634.15Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO8A1.058e-1634.15Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO551.058e-1634.15Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO241.058e-1634.15Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADB_SHEPA1.058e-1633.73Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADB_ENT381.058e-1630.59Fatty acid oxidation complex subunit alpha OS=Ente... [more]
ECHM_PONAB1.147e-1633.56Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii... [more]
PAAF_ECOLI1.382e-1634.76Probable enoyl-CoA hydratase paaF OS=Escherichia c... [more]
FADJ_YERE81.382e-1637.50Fatty acid oxidation complex subunit alpha OS=Yers... [more]
FADJ_ECOLU1.382e-1633.54Fatty acid oxidation complex subunit alpha OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16596 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-16_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908468 ID=DR908468; Name=DR908468; organism=Citrus sinensis; type=EST; length=620bp
CCGGTTGAGAGGCTTAAAGCATGCATTTGAAACTATCAGTGAGGATTCCT
CTGCTAATGTTGTCATGATACGTAGCTCGGTTCCTAAAGTGTTCTGTGCT
GGAGCTGATTTGAAGGAACGCAGGCAAATGAGTCCATCTGAGATTCATTT
TTATGTCAACACATTGCGATCTACATTCTCCTTCTTAGAGGCACTTCCTA
TTCCAACCATTGCTGTTATTGATGGAGCAGCATTGGGTGGTGGACTTGAA
ATGGCACTAGCATGTGATCTTCGCATCTGTGGAGAAGCAGCACTATTGGG
CTTGCCTGAAACAGGACTTGCTATAATTCCTGGGGCGGGTGGGACACAGC
GGCTTCCAAGATTAGTTGGAAAATCAGTAGCAAAAGATATTATATTTACT
GGCCGTAAAGTTAGTGGCAAAGATGCAATGTCTTTAGGTCTTGTCAATTA
CTGTGTTCCTGCTGGTCAAGCTCAGTTGAAGGCACTTGAATTGCTCAGGA
ATAAATCAGAAGGGTCCGATCGCCATTAGGATGGCTAAAAGGGCTATTAC
TAAGGGATTGGAGGTGGATATGGCATCGGCATTGGAACTGGAAAAGAGTG
CTACATTGGGACCTTGCATA
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