DR908468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_VIBF1 (Fatty acid oxidation complex subunit alpha OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16 Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 2 Query: 65 MIRSSVPKVFCAGADLKERR---QMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEG 514 ++ SS F GAD+ E + E+ +++ + F+ LE +P+PT++ I D R+ E A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA++LG+V+ V ++ +L+ EG Sbjct: 55 LLLSSDKSAFIVGADITEFLGLFDIPTEELSDWLHQANAIFNRLEDIPVPTLSAITGFALGGGCECVLATDFRLADETASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALALGMVDGVVSRETLITDSVTMLKKAIEG 207
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16 Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEG 514 L HA + + + + +++RS F GAD+ E + ++ +++ S F+ LE LP+PTI+ ++ D R+ +GLPET L I+PG GG+ RLPRL+G A +II G+ V A+ +GLV+ V A + + AL +LR G Sbjct: 39 LGHALDVLEKQNDLKGLLLRSE-KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQALKIGLVDGVVAAEKLRDGALAILRQAING 207
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16 Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRN 502 L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE LP PT + I D RI A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA+ +G V+ V + A+++L++ Sbjct: 36 LASLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALKVGAVDSVVAPQALEAAAIQMLKD 203
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_SHEB5 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16 Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRN 502 L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE LP PT + I D RI A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA+ +G V+ V + A+++L++ Sbjct: 36 LTSLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKD 203
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_SHEB2 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS223) GN=fadB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16 Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRN 502 L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE LP PT + I D RI A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA+ +G V+ V + A+++L++ Sbjct: 36 LASLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILTTDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKD 203
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLVN VP Sbjct: 44 IKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVP 188
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLVN VP Sbjct: 44 IKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVP 188
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLVN VP Sbjct: 44 IKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVP 188
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadJ PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 I DSS +++ S F AGAD+ + + F+ LEAL IP +A I C R+C + +LG+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLVN VP Sbjct: 46 IKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVP 190
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSEIHFYVNTLRS----TFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEL-LRNKSEGSDRH 526 I D+S +++ S F AGAD+ + E L F+ LE+LPIP +A I+ C R+C ++G+PE L ++PG GGTQRLPRLVG + A D++ TG+++ K A+ +GLV+ VP A+E+ L K +H Sbjct: 46 IKADTSIKGLVLVSGKKDSFVAGADIS---MLDACETATDAKQLSQQGHVVFNELESLPIPVVAAINGACLGGGLELALACHKRVCSLNPKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQALKMGLVDDAVPESILLRTAVEMALAGKRPAKKKH 213 The following BLAST results are available for this feature:
BLAST of DR908468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908468 ID=DR908468; Name=DR908468; organism=Citrus sinensis; type=EST; length=620bpback to top |