DR908468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SALA4 (Fatty acid oxidation complex subunit alpha OS=Salmonella agona (strain SL483) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNK 505 I E+ + V+ S+ F AGAD+ + E + + ++ALP+P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A+ GLV+ VP A+EL + + Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKE 205
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 20 HAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE-IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVP 460 + F+ + S +++ S P F AGAD+ E + FS + P+P +A I C R+C + LGLPE L ++PG+GGTQRLPRL+G S A DI+ TG+++ K A+ LGLV+ VP Sbjct: 56 NVFKQAQQSSGLKGLILISGKPDTFIAGADISMIAGCKTKEDARDLAEKGQKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDAVP 205
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_SHEB9 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS195) GN=fadB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRN 502 L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE LP PT + I D R+ A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA+ +G V+ V + A+++L++ Sbjct: 36 LASLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRVADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKD 203
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_ALISL (Fatty acid oxidation complex subunit alpha OS=Aliivibrio salmonicida (strain LFI1238) GN=fadB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 53/173 (30.64%), Postives = 87/173 (50.29%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPS---EIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNKSEG 514 LR L A + + + +++ SS F GAD+ E + + E+ +++ FS LE LP+PT++ I D R+ + A +GLPET L I+PG GG+ RLPRL+G A ++I TG+ KDA+ +G+V+ V ++ +L+ +G Sbjct: 36 LRSLGEAIDVLYKQKDLQALLL-SSGKSAFIVGADITEFLGLFDTPEEELSDWLHQANVIFSRLEDLPVPTLSAITGFALGGGCECVLATDFRLADDTASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALKIGMVDGIVSRETLIDASVSMLKQAIDG 207
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SHEAM (Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = 2 Query: 29 ETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSE-IHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALEL 493 + I DSS +++ S F AGAD+ +E F+ LE L IP +A I C R+C +++ +LG+PE L ++PG GGTQRLPRL+G + A D++ TG++V K A+ +GLV+ VP A+E+ Sbjct: 42 QEIKADSSIKGLVLISGKADSFVAGADISMLDACETAEDARLLSRQGHHVFAELEGLNIPVVAAIHGACLGGGLELALACHQRVCSDSSKTMLGVPEVQLGLLPGGGGTQRLPRLIGIAKALDLMLTGKQVRPKQAVKMGLVDDVVPESILLDTAIEM 199
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADJ_SALSV (Fatty acid oxidation complex subunit alpha OS=Salmonella schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 2 Query: 35 ISEDSSANVVMIRSSVPKVFCAGADLKERRQ-MSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRNK 505 I E+ + V+ S+ F AGAD+ + E + + ++ALP+P IA I C RIC + +LGLPE L ++PG+GGTQRLPRLVG S A D+I TG+++ + A+ GLV+ VP A+EL + + Sbjct: 46 IRENKALQGVVFISAKADNFIAGADINMIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALRAGLVDDVVPQTILLEAAVELAKKE 205
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_VIBVY (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus (strain YJ016) GN=fadB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 54/167 (32.34%), Postives = 84/167 (50.30%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELL 496 L L A + ++ S VM+ S + F GAD+ E + E+ ++ S F+ LE LP+PT+AV+ DLRI + +GLPET L I+PG GG RLPR++G A +II G+ ++A+ +GL++ V + + AL+ L Sbjct: 36 LASLDKALDALTAHSGLKGVMLTSD-KEAFIVGADITEFLGLFAKPEEELDQWLQFANSIFNKLEDLPVPTVAVVKGHTLGGGCECVLATDLRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRAEEALKIGLLDAVVDSDRLYASALQTL 201
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 54/167 (32.34%), Postives = 84/167 (50.30%), Query Frame = 2 Query: 5 LRGLKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELL 496 L L A + ++ S VM+ S + F GAD+ E + E+ ++ S F+ LE LP+PT+AV+ DLRI + +GLPET L I+PG GG RLPR++G A +II G+ ++A+ +GL++ V + + AL+ L Sbjct: 36 LASLDKALDALTAHSGLKGVMLTSD-KEAFIVGADITEFLGLFAKPEEELDQWLQFANSIFNKLEDLPVPTVAVVKGHTLGGGCECVLATDLRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRAEEALKIGLLDAVVDSDRLYASALQTL 201
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_SHEPW (Fatty acid oxidation complex subunit alpha OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 2 Query: 14 LKHAFETISEDSSANVVMIRSSVPKVFCAGADLKERRQMSPSEIHFYVNTLRST---FSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLRN 502 L A ++I +++S +M+ S+ P F GAD+ E + E ++ L F+ LE LP PTI+ I+ D R+ A +GLPET L IIPG GGT RLPR+VG A + I +G+ + A+++G ++ V Q Q AL++L++ Sbjct: 39 LNAALDSIKQNNSIKGLMLTSAKP-AFIVGADITEFLGLFAEEDAVLLSWLEEANVVFNKLEDLPFPTISAINGFALGAGCETILATDFRVADTTARIGLPETKLGIIPGFGGTVRLPRVVGTDNALEWITSGKDQRPEAALNVGAIDALVAPEQLQSAALKMLKD 203
BLAST of DR908468 vs. ExPASy Swiss-Prot
Match: FADB_PSYWF (Fatty acid oxidation complex subunit alpha OS=Psychrobacter sp. (strain PRwf-1) GN=fadB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.079e-16 Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 65 MIRSSVPKVFCAGADLKE---RRQMSPSEIHFYVNTLRSTFSFLEALPIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDAMSLGLVNYCVPAGQAQLKALELLR 499 +I +S VF AGAD+ E +EI ++ + F+ E LP P +A I+ C+ R+ G+ A +GLPET L I PG GG+ R PR++G A ++I TG+ +A+ LGLV+ V Q A++L++ Sbjct: 56 LIVTSSKGVFIAGADITEFVSHFNKEAAEIEKWIVDINGVFNRFEDLPFPKVAAINGAALGGGCEMTLVCEYRVMGDKAQIGLPETQLGIFPGFGGSVRTPRVIGIDNAVELIATGKAQKPAEALKLGLVDAVVAQDDLQEAAVDLVK 203 The following BLAST results are available for this feature:
BLAST of DR908468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908468 ID=DR908468; Name=DR908468; organism=Citrus sinensis; type=EST; length=620bpback to top |