DR908467

Overview
NameDR908467
Unique NameDR908467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: SDCS_STAA3 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain USA300) GN=sdcS PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.392e-32
Identity = 70/188 (37.23%), Postives = 108/188 (57.45%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFK 562
            EK+V  +F +   LW+TR     +  W         DGT ++ ++ LLFIIP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE TSN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I  K
Sbjct:  297 EKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: SDCS_STAAW (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MW2) GN=sdcS PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31
Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFK 562
            EK+V  +F +   LW+TR     +  W         DGT ++ ++ LLF+IP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE TSN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I  K
Sbjct:  297 EKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: SDCS_STAAS (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MSSA476) GN=sdcS PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31
Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFK 562
            EK+V  +F +   LW+TR     +  W         DGT ++ ++ LLF+IP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE TSN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I  K
Sbjct:  297 EKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: SDCS_STAAB (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sdcS PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31
Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFK 562
            EK+V  +F +   LW+TR     +  W         DGT ++ ++ LLF+IP+   +K  +++DW   K+LPW +++L G G A+A G+  SGLA  L + L  L     + I  ++ +    +TE TSN AT T++LP+L  ++  + VHPLLLM P A+ A  +++LP GTP N + F +G I  K
Sbjct:  297 EKVVQTIFVLASLLWITREFL--LKKWEV--TSSVADGTIAIFISILLFVIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK 480          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31
Identity = 78/204 (38.24%), Postives = 115/204 (56.37%), Query Frame = 2
Query:   11 VLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            VL  F +L+ LW +R     +PGW  +           D T ++ +ATLLFI+PS K K                   L+DW   + K+PW I+LLLG GFA+A G   SGL+  + K ++ L A P  AI  I+ L+ A+ TE TSN ATTTL LP+   +++++ ++PL +M+P  + A F+F+LP  TP N + FT GH++
Sbjct:  319 VLICFFLLVILWFSRD-PGFMPGWLTVAWVEGETKYVSDATVAIFVATLLFIVPSQKPKFNFRSQTEEERKTPFYPPPLLDWKVTQEKVPWGIVLLLGGGFALAKGSEASGLSVWMGKQMEPLHAVPPAAITLILSLLVAVFTECTSNVATTTLFLPIFASMSRSIGLNPLYIMLPCTLSASFAFMLPVATPPNAIVFTYGHLK 521          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A2_RABIT (Solute carrier family 13 member 2 OS=Oryctolagus cuniculus GN=SLC13A2 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.661e-31
Identity = 82/213 (38.50%), Postives = 121/213 (56.81%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGAL-FNDRAG-----DGTASVVMATLLFIIPS----MKQKGEK---------LMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFKI*SRQG 580
            EK V  +F +L+ LW TR       GWG L F+D +G     DG+AS+++   LF++PS    + Q  +          L++W    KK+PWNI+LLLG G+A+A G   SGL+  L   L  L+  P  A   I+CL+ A  TE TSN ATTTL+LP+L  +A+ + +HPL +M+P  + +  +F+LP  TP N + F+ G +     +R G
Sbjct:  332 EKAVFILFVILVLLWFTRE-PGFFHGWGNLVFSDASGRVMVSDGSASILIGVFLFMVPSKIPGLTQDPDNPGRLKAPPALLNWKLVNKKMPWNIVLLLGGGYALAKGSEESGLSQWLGNKLMPLQHVPPPATVFIICLLVATFTECTSNAATTTLLLPILASMAQAICLHPLYVMLPCTLASSLAFMLPVATPPNAIVFSFGGLRVSDMARAG 543          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A2_RAT (Solute carrier family 13 member 2 OS=Rattus norvegicus GN=Slc13a2 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.951e-31
Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = 2
Query:   20 VFGMLIALWMTRSITDDIPGWG-ALFNDRAG-----DGTASVVMATLLFIIPSM--------KQKGE-----KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFKI*SRQG 580
            +F +L+ LW TR      PGWG  +F +  G     DGT ++ ++ ++FIIPS         K+ G+      ++ W     K+PWNI++LLG GFA+A G   SGL++ L   L  L+  P  A A I+CL+ AI TE TSN ATTTL LP+L  +A+ + +HPL +M+P  + A  +F+LP  TP N + F+ G ++    +R G
Sbjct:  330 LFVLLVVLWFTRE-PGFFPGWGDTVFANEKGQSMPSDGTVAIFISLVMFIIPSKIPGLMEDPKKPGKLKAPPAILTWKTVNDKMPWNIVILLGGGFALAKGSEQSGLSEWLGDKLTPLQHIPPSATAVILCLLIAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAG 535          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A5_RAT (Solute carrier family 13 member 5 OS=Rattus norvegicus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.761e-30
Identity = 75/204 (36.76%), Postives = 114/204 (55.88%), Query Frame = 2
Query:   11 VLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            VL  FG+LI LW +R     +PGW ++           D T ++ +A LLFI+PS K K                   L++W   + K+PW I+LLLG GFA+A G  TSGL++ +++ ++ L +     I  I+  I A+ TE TSN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH++
Sbjct:  323 VLFCFGLLIILWFSRD-PGFMPGWLSIAWIEGNTKHVTDATVAIFVAILLFIVPSQKPKFNFSRQTEEERKTPFYPPPLLNWKVTQEKVPWGIVLLLGGGFAMAKGCETSGLSEWMARQMEPLSSVRPAIITLILSCIVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTLSASLAFMLPVATPPNAIVFAYGHLK 525          

HSP 2 Score: 21.557 bits (44), Expect = 4.761e-30
Identity = 9/27 (33.33%), Postives = 14/27 (51.85%), Query Frame = 1
Query:  553 RIQDMIKTGLPLRCWHCCSGLSNAYTW 633
            ++ DM+KTGL +      S   +  TW
Sbjct:  525 KVIDMVKTGLVMNILGIASVFLSVNTW 551          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A2_MOUSE (Solute carrier family 13 member 2 OS=Mus musculus GN=Slc13a2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30
Identity = 81/213 (38.03%), Postives = 119/213 (55.87%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWG-ALFNDRAG-----DGTASVVMATLLFIIPSM--------KQKGE-----KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFKI*SRQG 580
            EK V  +F +L+ LW TR      PGWG   F ++ G     DGT ++ ++ ++FIIPS         K+ G+      ++ W     K+PWNI++LLG GFA+A G   SGL+  L   L  L+  P  A   I+ L+ AI TE TSN ATTTL LP+L  +A+ + +HPL +M+P  + A  +F+LP  TP N + F+ G ++    +R G
Sbjct:  324 EKAVTFLFVLLVVLWFTRE-PGFFPGWGDTAFANKKGQSMVSDGTVAIFISLIMFIIPSKIPGLTEDPKKPGKLKAPPAILTWKTVNDKMPWNILILLGGGFALAKGSEESGLSKWLGDKLTPLQHVPPSATVLILSLLVAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAG 535          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A2_HUMAN (Solute carrier family 13 member 2 OS=Homo sapiens GN=SLC13A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30
Identity = 80/213 (37.56%), Postives = 118/213 (55.40%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA------GDGTASVVMATLLFIIPS----MKQKGEK---------LMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFKI*SRQG 580
            EK +  +F +L+ LW TR       GWG L    A       DGT ++ +  ++FIIPS    + Q  E          L+DW    +K+PWNI+LLLG G+A+A G   SGL++ L   L  L++ P  AIA I+ L+ A  TE TSN ATTT+ LP+L  +A+ + +HPL +M+P  +    +F+LP  TP N + F+ G ++    +R G
Sbjct:  329 EKAISILFVILVLLWFTRE-PGFFLGWGNLAFPNAKGESMVSDGTVAIFIGIIMFIIPSKFPGLTQDPENPGKLKAPLGLLDWKTVNQKMPWNIVLLLGGGYALAKGSERSGLSEWLGNKLTPLQSVPAPAIAIILSLLVATFTECTSNVATTTIFLPILASMAQAICLHPLYVMLPCTLATSLAFMLPVATPPNAIVFSFGDLKVLDMARAG 540          
The following BLAST results are available for this feature:
BLAST of DR908467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SDCS_STAA39.392e-3237.23Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAW1.227e-3136.70Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAS1.227e-3136.70Sodium-dependent dicarboxylate transporter sdcS OS... [more]
SDCS_STAAB1.227e-3136.70Sodium-dependent dicarboxylate transporter sdcS OS... [more]
S13A5_HUMAN2.092e-3138.24Solute carrier family 13 member 5 OS=Homo sapiens ... [more]
S13A2_RABIT4.661e-3138.50Solute carrier family 13 member 2 OS=Oryctolagus c... [more]
S13A2_RAT7.951e-3138.65Solute carrier family 13 member 2 OS=Rattus norveg... [more]
S13A5_RAT4.761e-3036.76Solute carrier family 13 member 5 OS=Rattus norveg... [more]
S13A2_MOUSE5.153e-3038.03Solute carrier family 13 member 2 OS=Mus musculus ... [more]
S13A2_HUMAN8.790e-3037.56Solute carrier family 13 member 2 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16595 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-15_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908467 ID=DR908467; Name=DR908467; organism=Citrus sinensis; type=EST; length=634bp
TGAAAAGATGGTACTAGCTGTATTTGGGATGCTAATAGCATTGTGGATGA
CAAGATCAATAACAGATGACATTCCAGGTTGGGGAGCACTCTTCAATGAC
CGTGCTGGTGATGGAACTGCTAGTGTTGTGATGGCAACATTGTTGTTCAT
AATTCCGAGCATGAAGCAAAAGGGAGAAAAATTGATGGATTGGAACAAAT
GCAAGAAGCTACCTTGGAACATTATATTGCTTTTAGGGGCTGGCTTTGCT
ATAGCTGATGGAGTCAGGACTAGCGGTCTTGCTGATGATCTGTCAAAAGC
ATTGGATTTCCTGGAGGCGGCGCCATATTTAGCCATTGCACCTATCGTAT
GTCTGATTAGCGCGATTATTACTGAATTCACATCAAATAATGCCACAACA
ACTCTCGTTCTTCCACTTCTGATCCAAATAGCAAAAACTATGCATGTTCA
TCCATTGCTTCTTATGGTTCCTGGAGCAATTGGAGCACAATTTTCTTTCT
TGTTGCCGACTGGAACCCCTTCAAATATTGTTGGATTCACAACCGGGCAC
ATCGAATTCAAGATATGATCAAGACAGGGCTGCCCTTAAGATGCTGGCAT
TGCTGCTCTGGCCTTTCTAATGCCTACACTTGGT
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