DR908467

Overview
NameDR908467
Unique NameDR908467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.269e-28
Identity = 65/198 (32.83%), Postives = 110/198 (55.56%), Query Frame = 2
Query:   23 FGMLIALWMTRSITDDIPGWGALFNDRA--GDGTASVVMATLLFIIPSMKQ---------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFK 562
            F ++  LW TR     +PGW + F  +    D T SV +  LLF+IP+ K                  E ++ W   +K +PW I++L+G G+A+A G ++SGL+  +   +  L + P  A+  + C++ +I+TEF SN AT T+ LP+L  +++T+H++PL  ++P  +   F+ +LP G P N + F+ GH + K
Sbjct:  383 FILMTVLWFTRE-PGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKNDGENQEHSLGTEPIITWKDFQKTMPWEIVILVGGGYALASGSKSSGLSTWIGNQMLSLSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIK 579          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: NAD1_CAEEL (Sodium-dependent low-affinity dicarboxylate transporter 1 OS=Caenorhabditis elegans GN=nac-1 PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.269e-28
Identity = 63/197 (31.98%), Postives = 111/197 (56.35%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPS----------MKQKGEKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            E  V+  F +L+ LW+ R     +PGWG +F D    D T+++ +  LLF +P            ++    L+DW   + + PW+++ LLG GFA+A GV+ SGL+ D+   + +L+   +  I  I  +IS  +T   SN    ++ +P++ ++A+++ + PL  M+P  I A F+FLLP  TP N + F++G+++
Sbjct:  321 EMAVIFCFALLLVLWILRE-PQVVPGWGEMFKDEFVSDATSAMFIVILLFTLPEKLPSSRGSSEQRKASSGLLDWATVQDRFPWSVLFLLGGGFALAAGVKESGLSHDIGAIMRYLDVFNHNIIMLICIIISVTLTNVCSNTVIASIFIPIVAELARSLEIDPLNFMLPVTISASFAFLLPVATPPNAIVFSSGYLK 516          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.823e-28
Identity = 74/203 (36.45%), Postives = 109/203 (53.69%), Query Frame = 2
Query:   11 VLAVFGMLIALWMTRSITDDIPGWGALF-----NDRAGDGTASVVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHI 553
            VL  F +L+ LW +R     +PGW +            D T ++ +A LLFIIPS K K                   L+DW   + K+PW+I+LLLG GFA+A G  TSGL+  ++  ++ L       I  I+  + A+ TE TSN ATTTL LP+   +A+++ +HPL +M+P  + A  +F+LP  TP N + F  GH+
Sbjct:  323 VLFCFTLLVILWFSRD-PGFMPGWLSFAWVEGNTVHITDATVAIFVAILLFIIPSQKPKFNFSSQTEEERKTPFYPPALLDWKVAQEKVPWDIVLLLGGGFAMAKGCETSGLSKWMAAQMEPLRLVKPAVITLILSCLVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHL 524          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: NAD3_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 3 OS=Caenorhabditis elegans GN=nac-3 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 8.228e-28
Identity = 68/200 (34.00%), Postives = 116/200 (58.00%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMATLLFIIPS-------------MKQKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            EK V   F +L++LW+ R+    +PG+G  F   A  D T+++++A LLF++PS             +K++G  LMDW   ++  PW+++LLLG GFA+A GV+ SGL+  +  +L  +E  P   +  +  LI+ +IT   SN  T ++ +P++  +A+    HP  LM+P  + + F+F+ P GTP N + F +G ++
Sbjct:  320 EKSVFVCFCILLSLWVFRN-PGVVPGFGVFFKKGAYTDATSAMIVAFLLFVLPSERPDLATYIKKEDLKKRG-CLMDWKTMQETFPWSVVLLLGGGFALAAGVKESGLSLLIGNSLSSIEHLPLWILQLLTMLIAMVITNICSNTVTASIFVPIVATLAQRAGHHPFTLMLPTTLASSFAFIFPVGTPPNAIVFGSGMVK 517          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: YKG6_CAEEL (Uncharacterized transporter B0285.6 OS=Caenorhabditis elegans GN=B0285.6 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.403e-27
Identity = 70/198 (35.35%), Postives = 113/198 (57.07%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR-AGDGTASVVMATLLFIIPSMKQ--------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDF-LEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTT 544
            EK  L +F + +  W++ S    IPGW  LF      D  + +V   LLFI P  K               + E L+DW+  ++  PW+IILLLGAGFAI+D VR SGL+  ++ +L+  +   P+  +  I+ ++  ++TEF++N+AT ++ +P+  ++A+ +  HPL   +P AIG  FSF+LP  TP+N + + T
Sbjct:  322 EKSTLVIFVLAVLSWVS-SDPKVIPGWSDLFRKGYVTDSCSGLVAVFLLFIWPKKKPDFRIFRKDKSRPSVRQEPLIDWDCVRRRFPWSIILLLGAGFAISDAVRVSGLSSLIACSLNSTISKMPFFVMQIILSIVVVVMTEFSTNSATASIFIPISFKMAEAVGAHPLYFSIPTAIGPSFSFMLPMATPANAIVYET 518          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A1_HUMAN (Solute carrier family 13 member 1 OS=Homo sapiens GN=SLC13A1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.965e-27
Identity = 70/201 (34.83%), Postives = 111/201 (55.22%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            E + L +F ++  LW +R     +PGW ALF++  G   D T ++++  L F+IP+         GE        L+ W + +  +PW+I +L+G GFA+ADG   SGL+  +   L  L + P   I  I  L+   +TE  SN AT TL LP+L  +A+ +HV+PL +++P  +   F+FLLP   P N + F+ GH++
Sbjct:  347 EIVTLVLFIIMALLWFSRD-PGFVPGWSALFSEYPGFATDSTVALLIGLLFFLIPAKTLTKTTPTGEIVAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCEESGLSKWIGNKLSPLGSLPAWLIILISSLMVTSLTEVASNPATITLFLPILSPLAEAIHVNPLYILIPSTLCTSFAFLLPVANPPNAIVFSYGHLK 546          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A1_RAT (Solute carrier family 13 member 1 OS=Rattus norvegicus GN=Slc13a1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.457e-26
Identity = 68/201 (33.83%), Postives = 110/201 (54.73%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            E + L +F ++  LW +R     + GW  LF++  G   D T ++V   L F+IP+ K       G+        L+ W + +  +PW+I +L+G GFA+ADG + SGL+  +   L  L + P   I  I  LI   +TE  SN AT T++ P+L  +A+ +HV+PL +++P  +   F+FLLP   P N + F+ GH++
Sbjct:  347 EIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKLTKMTSTGDIIAFDYSPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSSWIGSKLSPLGSLPVWLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIHVNPLHILLPSTLCTSFAFLLPVANPPNAIVFSYGHLK 546          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: S13A1_MOUSE (Solute carrier family 13 member 1 OS=Mus musculus GN=Slc13a1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.701e-26
Identity = 68/201 (33.83%), Postives = 110/201 (54.73%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAG---DGTASVVMATLLFIIPSMK-----QKGE-------KLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIE 556
            E + L +F ++  LW +R     + GW  LF++  G   D T ++V   L F+IP+ K       GE        L+ W + +  +PW+I +L+G GFA+ADG + SGL++ +   L  L + P   I  I  LI   +TE  SN AT T++ P+L  +A+ + V+PL +++P  +   F+FLLP   P N + F+ GH++
Sbjct:  346 EIVTLVIFIVMALLWFSRD-PGFVTGWSVLFSEYPGYVTDSTVALVAGILFFLIPAKKVTKMTSAGEIIAFDYTPLITWKEFQSFMPWDIAILVGGGFALADGCQVSGLSNWIGSKLSPLGSLPVRLIILISSLIVTSLTEVASNPATITILFPILSPLAEAIQVNPLQILLPSTLCTSFAFLLPVANPPNAIVFSYGHLK 545          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: NAD2_CAEEL (Sodium-dependent high-affinity dicarboxylate transporter 2 OS=Caenorhabditis elegans GN=nac-2 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.963e-21
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDR--AGDGTASVVMATLLFIIPSMK----QKGEKLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKAL-DFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTT 544
            EK V   F +LI  W++R      PGWG L   R    D  + V+++ +LF+ P            ++ W   K K  W+  LL+GAG+AI++GV  SGL+  +S  + +       L +   V  I  I+TEF SN +T ++ +P+ + +A++M VHPL L +P  +   F+F+LP  TP N V + T
Sbjct:  308 EKSVFVFFILLIGSWISRD-PGFTPGWGDLLPHRNFISDSVSGVLISCILFVWPKDPFDPIDPMAPILKWTDMKSKFSWSCTLLIGAGYAISEGVDKSGLSRLISCGMKNIFVGMSSLPLQLTVTTIIVIMTEFASNVSTGSIFIPISLGVAESMGVHPLYLALPTTVACSFAFMLPISTPPNAVVYDT 495          
BLAST of DR908467 vs. ExPASy Swiss-Prot
Match: INDY2_DROME (Protein I'm not dead yet 2 OS=Drosophila melanogaster GN=Indy-2 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19
Identity = 55/203 (27.09%), Postives = 96/203 (47.29%), Query Frame = 2
Query:    2 EKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMATLLFIIPSM--------------KQKGEKLMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEFK 562
            E  +   F  +I L +TR     +PGW  L N +  G  +    +  L+F +P+                Q  + ++ W    + +PW ++ LLG GFA+A   R +GL   +SKA+  L   P + +  I  +++   + F +N     +VLP+L +++  + +HPL+L +P  +G    + LP  TP N +     HI+ K
Sbjct:  313 EIQMAIAFAFMIVLLITRK-PGFVPGWSDLINRKVVGSASGLSFIVLLIFALPTQYTFFKYCCGKGPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTK 514          
The following BLAST results are available for this feature:
BLAST of DR908467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
S13A4_HUMAN1.269e-2832.83Solute carrier family 13 member 4 OS=Homo sapiens ... [more]
NAD1_CAEEL1.269e-2831.98Sodium-dependent low-affinity dicarboxylate transp... [more]
S13A5_MOUSE4.823e-2836.45Solute carrier family 13 member 5 OS=Mus musculus ... [more]
NAD3_CAEEL8.228e-2834.00Sodium-dependent high-affinity dicarboxylate trans... [more]
YKG6_CAEEL1.403e-2735.35Uncharacterized transporter B0285.6 OS=Caenorhabdi... [more]
S13A1_HUMAN6.965e-2734.83Solute carrier family 13 member 1 OS=Homo sapiens ... [more]
S13A1_RAT3.457e-2633.83Solute carrier family 13 member 1 OS=Rattus norveg... [more]
S13A1_MOUSE7.701e-2633.83Solute carrier family 13 member 1 OS=Mus musculus ... [more]
NAD2_CAEEL1.963e-2133.86Sodium-dependent high-affinity dicarboxylate trans... [more]
INDY2_DROME1.837e-1927.09Protein I'm not dead yet 2 OS=Drosophila melanogas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16595 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-15_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908467 ID=DR908467; Name=DR908467; organism=Citrus sinensis; type=EST; length=634bp
TGAAAAGATGGTACTAGCTGTATTTGGGATGCTAATAGCATTGTGGATGA
CAAGATCAATAACAGATGACATTCCAGGTTGGGGAGCACTCTTCAATGAC
CGTGCTGGTGATGGAACTGCTAGTGTTGTGATGGCAACATTGTTGTTCAT
AATTCCGAGCATGAAGCAAAAGGGAGAAAAATTGATGGATTGGAACAAAT
GCAAGAAGCTACCTTGGAACATTATATTGCTTTTAGGGGCTGGCTTTGCT
ATAGCTGATGGAGTCAGGACTAGCGGTCTTGCTGATGATCTGTCAAAAGC
ATTGGATTTCCTGGAGGCGGCGCCATATTTAGCCATTGCACCTATCGTAT
GTCTGATTAGCGCGATTATTACTGAATTCACATCAAATAATGCCACAACA
ACTCTCGTTCTTCCACTTCTGATCCAAATAGCAAAAACTATGCATGTTCA
TCCATTGCTTCTTATGGTTCCTGGAGCAATTGGAGCACAATTTTCTTTCT
TGTTGCCGACTGGAACCCCTTCAAATATTGTTGGATTCACAACCGGGCAC
ATCGAATTCAAGATATGATCAAGACAGGGCTGCCCTTAAGATGCTGGCAT
TGCTGCTCTGGCCTTTCTAATGCCTACACTTGGT
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