DR908466

Overview
NameDR908466
Unique NameDR908466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI---PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +G  ++I         NG  I + ++IL V +  G K G +ITF  +G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R++ I   P   V H +  + V  EGMPI   P ++G L
Sbjct:  180 QGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRL 319          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI---PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +G  ++I         NG  I + ++IL V +  G K G +ITF  +G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R++ I   P   V H +  + V  EGMPI   P ++G L
Sbjct:  181 QGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRL 320          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI---PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +G  ++I         NG  I + ++IL V +  G K G +ITF  +G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R++ I   P   V H +  + V  EGMPI   P ++G L
Sbjct:  181 QGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRL 320          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI---PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +G  ++I         NG  I + ++IL V +  G K G +ITF  +G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R++ I   P   V H +  + V  EGMPI   P ++G L
Sbjct:  181 QGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRL 320          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPID--NVIHPNYEETVPREGMPIQNEPSKRGNL 541
            KGT + I          G+ +  E+ +L V+V+ G +   +ITFE + +   +    D+VF++ +K H  F R G DL V  T++L EAL G+   LT LDGRSL I  +   V+ P+  + +  EGMPI   P  +G L
Sbjct:  195 KGTGETINDRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKL 334          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI---PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            +G  ++I         NG  I + ++IL V +  G K G +ITF  +G+ +  ++P D++ ++D+K H+VFTR G DL +   I L EAL G+   ++TLD R++ I   P   V H +  + V  EGMPI   P ++G L
Sbjct:  181 QGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDI-KCVLNEGMPIYRRPYEKGRL 320          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.800e-15
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 2
Query:  191 IKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPID--NVIHPNYEETVPREGMPIQNEPSKRGNL 541
            ++ +++L V V+ G + G RITF  + +   +    D+VF++ +K H  F R G+DL    T++L EAL G+   LT LDGR L I  +   V+ P+  + +  EGMP+   P  RG L
Sbjct:  195 VQEKKVLEVHVEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKL 313          

HSP 2 Score: 22.7126 bits (47), Expect = 5.800e-15
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  514 ERAIKERQLEIKFNIKFPPSLTAEQ 588
            +R     +L I+F + FP SLT +Q
Sbjct:  305 QRPFMRGKLYIQFLVDFPDSLTPDQ 329          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.988e-15
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDING-NTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNI--PIDNVIHPNYEETVPREGMPIQNEPSKRGNL 541
            KG  ++I         +G   I+ ++I+ V V+ G K G +I F  +G+ +  ++P DV+ ++D+K HSVF R G+DLI+   I L EAL G+   + TLD R L I      VI       V  EGMPI   P ++G L
Sbjct:  182 KGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGIL 321          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.964e-14
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGNTIKVEE-ILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDN--VIHPNYEETVPREGMPIQNEPSKRG 535
            KG  ++I       + +G  +  E+ I+ V V+ G K G +I F  +G+ +  + P DV+ ++D+K HSVF R G DLI+   I L EAL G+   + TLD R L I   +  VI     + +  EGMPI   P ++G
Sbjct:  182 KGQGERINPKDRCENCSGAKVTREKKIIEVHVEKGMKDGQKILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKG 319          
BLAST of DR908466 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.110e-14
Identity = 46/140 (32.86%), Postives = 72/140 (51.43%), Query Frame = 2
Query:  131 KGTTKKIKISREIVDINGN-TIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPID--NVIHPNYEETVPREGMPIQNEPSKRGNL 541
            KGT + I          G   ++ +++L V V+ G + G +ITF  + +   +    D+VF++ +K H  F R G+DL    +++L EAL G+   LT LD R L I  +   VI P+  + +  EGMP+   P  RG L
Sbjct:  195 KGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKL 334          

HSP 2 Score: 23.483 bits (49), Expect = 6.110e-14
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  514 ERAIKERQLEIKFNIKFPPSLTAEQ 588
            +R     +L I F++ FP SLT +Q
Sbjct:  326 QRPFMRGKLYIHFSVDFPDSLTPDQ 350          
The following BLAST results are available for this feature:
BLAST of DR908466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DNJA1_PONAB2.745e-1535.46DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE2.745e-1535.46DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN2.745e-1535.46DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN2.745e-1535.46DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ3_ARATH2.745e-1535.71Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ1_CERAE2.745e-1535.46DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJH1_ALLPO5.800e-1536.13DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJA4_HUMAN7.988e-1536.43DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA4_MOUSE3.964e-1435.51DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJH2_ALLPO6.110e-1432.86DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16594 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908466 ID=DR908466; Name=DR908466; organism=Citrus sinensis; type=EST; length=634bp
CAGTTCCTCAAATGAGACATTTGGTGATGATGATGTTTTTCATTCCTTTA
ATAGAGTATTTGTAATGGGTGGACCTAAGAAAGCACCTCCGATTGAGAAT
AGGCTGCCTTGTACCCTTGAGGAACTCTACAAGGGGACTACTAAGAAGAT
AAAGATCTCTAGGGAAATTGTTGACATCAATGGTAATACCATCAAGGTGG
AAGAAATTCTAACTGTTGATGTGAAGCCTGGATGGAAGAAGGGTACAAGG
ATCACCTTCGAAGAGAAGGGAAATGTGCAGCAAAATGTTAAGCCTGCAGA
CGTCGTCTTCATCGTGGACGAGAAGCCTCACAGTGTGTTTACTCGAGATG
GGAATGATTTGATCGTCACACGGACGATAACTCTCGGTGAGGCCTTGGAA
GGTTATCCGGTTCGTCTCACTACCCTGGATGGAAGGAGTTTAAACATCCC
AATCGACAATGTGATTCATCCCAACTATGAGGAGACTGTCCCGAGAGAGG
GGATGCCAATTCAGAACGAGCCATCAAAGAGAGGCAACTTGAAATCAAGT
TCAACATCAAGTTCCCACCAAGTTTGACTGCAGAGCAAAAGGCCGGGATC
AAGTTTTTACAGCTTTTAATCGATGCTTACCTTG
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