DR908465

Overview
NameDR908465
Unique NameDR908465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1
Query:   46 VAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFPH 240
            +A+P + +RGVRQRHWG WV+EIR P  +TR+WLGTF+T              + G  AR NFP+
Sbjct:    1 MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 43/114 (37.72%), Postives = 58/114 (50.88%), Query Frame = 1
Query:   46 VAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFP-HLKHHGAHVTGEFGDYKP---------LHASVDAKLQ---AICQNLALN 348
            ++   K Y+G+R R WGKWVAEIR P  R+R+WLG++ T              LRG  ARLNFP  +   G    G  GD  P         + A VDA+L+    + +NL +N
Sbjct:   29 ISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDAELRLENRMVENLDMN 142          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.102e-11
Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 1
Query:   52 KPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFPHL 243
            K  + Y+G+R R WGKWVAEIR P  R+RLWLG++ T              LRG  ARLNFP L
Sbjct:   16 KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPEL 79          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11
Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1
Query:   64 LYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFPH 240
            LYRG+RQR WGKW AEIR P    R+WLGTF T             K+RG  A+LNFP+
Sbjct:   49 LYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 31/57 (54.39%), Postives = 35/57 (61.40%), Query Frame = 1
Query:   67 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFP 237
            YRGVRQR WGKW AEIR PK   R+WLGTF+T             K +G  A+LNFP
Sbjct:   39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 33/57 (57.89%), Postives = 35/57 (61.40%), Query Frame = 1
Query:   67 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFP 237
            +RGVRQR WGKWVAEIR PK  TRLWLGTF T              + G  ARLNFP
Sbjct:   78 FRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFP 134          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11
Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 1
Query:    7 PKAVPMKHVSNAQVAKPT-KLYRGVRQRHWGKWVAEIRLP-KNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFPH 240
            P   P    + AQ   P  + YRGVRQR WGK+ AEIR P KN  R+WLGT++T             ++RG  A LNFPH
Sbjct:   78 PSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPH 157          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11
Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 1
Query:    7 PKAVPMKHVSNAQVAKPT-KLYRGVRQRHWGKWVAEIRLP-KNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFPH 240
            P   P    + AQ   P  + YRGVRQR WGK+ AEIR P KN  R+WLGT++T             ++RG  A LNFPH
Sbjct:   82 PSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPH 161          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF16_ARATH (Ethylene-responsive transcription factor ERF016 OS=Arabidopsis thaliana GN=ERF016 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 1
Query:   67 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFP 237
            Y GVR+R WGKWVAEIRLP +R R+WLG+FD+              LRG  AR NFP
Sbjct:    7 YTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFP 63          
BLAST of DR908465 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11
Identity = 31/61 (50.82%), Postives = 37/61 (60.66%), Query Frame = 1
Query:   61 KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGEFARLNFPHL 243
            K Y+G+R R WGKWVAEIR P  R+R+WLG++ T              LRG  ARLNFP L
Sbjct:   26 KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPEL 86          
The following BLAST results are available for this feature:
BLAST of DR908465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ERF03_ARATH2.405e-1147.69Ethylene-responsive transcription factor ERF003 OS... [more]
RAP29_ARATH3.141e-1137.72Ethylene-responsive transcription factor RAP2-9 OS... [more]
ERF10_ARATH4.102e-1150.00Ethylene-responsive transcription factor ERF010 OS... [more]
ERF71_ARATH5.358e-1152.54Ethylene-responsive transcription factor ERF071 OS... [more]
EF113_ARATH6.997e-1154.39Ethylene-responsive transcription factor ERF113 OS... [more]
DRE2B_ARATH6.997e-1157.89Dehydration-responsive element-binding protein 2B ... [more]
ERF2_TOBAC9.139e-1145.00Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY9.139e-1145.00Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF16_ARATH9.139e-1154.39Ethylene-responsive transcription factor ERF016 OS... [more]
ERF08_ARATH9.139e-1150.82Ethylene-responsive transcription factor ERF008 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16593 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-03_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908465 ID=DR908465; Name=DR908465; organism=Citrus sinensis; type=EST; length=634bp
CTCAGCCCAAAAGCAGTCCCAATGAAGCATGTCAGCAACGCTCAAGTTGC
CAAGCCAACAAAGCTTTACAGGGGTGTGAGACAGAGGCACTGGGGCAAAT
GGGTTGCTGAAATAAGACTCCCCAAGAACAGAACCAGGCTTTGGCTTGGC
ACTTTTGATACAGCTGAAGAAGCTGCTTTGGCCTATGACCAAGCTGCTTA
TAAGCTAAGAGGAGAGTTTGCAAGACTCAATTTCCCGCACCTCAAGCATC
ATGGAGCCCATGTCACTGGTGAATTTGGTGATTACAAGCCTCTTCATGCT
TCCGTTGATGCAAAATTGCAAGCCATCTGCCAAAACTTGGCTCTTAACAA
CAACGTGCAGAAACAAACATCCAAGCAGCAGCAGCAGCAGCAGGAGGCTG
AAACAAAACCAGTGTTGTTACCAGCTACTGCTGCTAACATAAAGGTTGAG
AACACATCAGCAACTTCATTATCATCACCAACACCAGATCATTCATTATC
TGATGCTGGCTCATCATCGCCAGAATCTGACGTATCTTTCTTAGACTTCA
ATGACACCAAGTGGGAAACTGAAATGGATGCTTTTGGCTTGGAGAAATAC
CCTTCTGTGGAATTGATTGGGAAGCTATTAGAAA
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