DR908460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908460 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12 Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 243 GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 458 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL DPV NN Sbjct: 185 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
BLAST of DR908460 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.329e-12 Identity = 51/153 (33.33%), Postives = 71/153 (46.41%), Query Frame = 3 Query: 6 IAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFV-QGLVTGVGPYQNLLDHLADPVNNNV 461 + PE LG + + A G G W + T+ +E + FAE +R + +P +KY GG+ DP KD ++ KLKE+KNGRLAMLA +G+ V Q G GP +NL HLADP +NN+ Sbjct: 102 LVPEALGLGNWVKAQEWAA-LPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTME-KDPEK---------KKYPGGAFDPL----------GFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
BLAST of DR908460 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 51/159 (32.08%), Postives = 71/159 (44.65%), Query Frame = 3 Query: 6 IAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPY------TLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFV-QGLVTGVGPYQNLLDHLADPVNNNV 461 I PE LG + + A P G Y P T+ +E + F EH+R + + +KY GG+ DP KD ++ K+KE+KNGRLA+LAI+G+ V Q G GP +NL HLADP +NN+ Sbjct: 103 IVPEALGLGNWVKAQEWAAI-------PGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEK----------KKYPGGAFDPL----------GYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234 The following BLAST results are available for this feature:
BLAST of DR908460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908460 ID=DR908460; Name=DR908460; organism=Citrus sinensis; type=EST; length=636bpback to top |