DR908456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.675e-28 Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 62 GGNSPCASCKLLRRRCTKDCIFAPYFPPDDPHK-FAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 376 GG PC +CK LRR+C CIFAPYF + FA VHKVFGASNVSK+L +PVH+R+DAV ++ YEA AR+RDP+YGCV I LQ QV LQ +++ +A + Sbjct: 33 GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHL 138
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.872e-28 Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 62 GGNSPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 376 G SPC +CK LRR+C DCIFAPYF + +FA +HKVFGASNVSK+L +P+H R +AV ++ YEA AR+ DPVYGCV I LQ QV+ LQ Q+ +A+I Sbjct: 11 GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQI 116
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.363e-28 Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 62 GGNSPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 379 G SPC +CK LRR+C CIFAP+F D +FA VHKVFGASNVSK+L +PV++R DAV ++ YEA AR+ DPVYGCV I LQ QV+ LQ +L+V +++++ Sbjct: 47 GTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSVVQSQLI 153
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.085e-27 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 2 Query: 62 GGNSPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 376 GG PC +CK LRR+C CIFAPYF + FA VHKVFGASNVSK+L +P H+R DAV S+ +EA AR+RDP+YGCV I LQ QV LQ +L+ +A + Sbjct: 13 GGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHL 118
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 7.035e-27 Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 62 GGNSPCASCKLLRRRCTKDCIFAPYFPP-DDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 376 G PC +CK LRR+C DC+FAPYF + F VHKVFGASN SK+L +P +R DAV +L YEA AR+RDPVYGCVG I LQ+QV LQ +LA + ++ Sbjct: 7 GCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPASRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQL 112
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD14_ARATH (LOB domain-containing protein 14 OS=Arabidopsis thaliana GN=LBD14 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.016e-25 Identity = 56/107 (52.34%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 59 MGG-NSPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAE 373 MGG SPC CK LRR+C + C+FAPYF ++ FA +HKVFGASN SK++ LP H R DAV ++ YEA++R+ DP+YGCV I LQ QV LQ Q+ + E Sbjct: 1 MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREE 107
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD17_ARATH (LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.956e-25 Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 62 GGNSPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAE 373 G SPC +CK LRRRC K C+FAPYF + FA +H+VFGASN SK+L LP+ R +A +++ YEA AR +DP+YGCV I LQ QV LQ QL + + + Sbjct: 3 GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQ 107
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.467e-24 Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 71 SPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAE 373 SPC +CK LRR+C K C+FAPYF + FA +HKVFGASN SK+L LP+ R +A ++ YEA AR++DP+YGCV I LQ QV LQ +L + + + Sbjct: 10 SPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQ 111
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD28_ARATH (LOB domain-containing protein 28 OS=Arabidopsis thaliana GN=LBD28 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.719e-23 Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 2 Query: 68 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI--LCIXXXXXXXXXXXXIDPDDKPFLLQNNLPH 469 ++PCA+CK LRR+CT+DC+FAPYFP + VHKVFGAS+V+ ++ L QR A+ +L +EA + DPV GC+G I L +Q+ L+ QLA+ + E+ CI ++ + P ++ + P+ Sbjct: 10 STPCAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTLAWEAQVQANDPVNGCLGIIYNLLSQIKDLEEQLAIVKNELASYCIVPTFVPPPSMTNLEMHNNPMMIPEHTPN 145
BLAST of DR908456 vs. ExPASy Swiss-Prot
Match: LBD33_ARATH (LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.373e-22 Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 2 Query: 71 SPCASCKLLRRRCTKDCIFAPYFPPDDPHK-FAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQL 355 S C +CK LRR+C +DC+F+PYF + FA VHKVFGASNVSK L LP HQR A ++ YEA +R+RDPVYGCV I L QV LQ ++ Sbjct: 6 SSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQRNIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEI 101 The following BLAST results are available for this feature:
BLAST of DR908456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908456 ID=DR908456; Name=DR908456; organism=Citrus sinensis; type=EST; length=637bpback to top |